R-4.1-branch, high-sierra, x86_64

check   conf   build   
check - 2021-11-30 20:38:25.000000000 -0600

Testing examples for package 'base' Testing examples for package 'tools' comparing 'tools-Ex.Rout' to 'tools-Ex.Rout.save' ... OK Testing examples for package 'utils' Testing examples for package 'grDevices' comparing 'grDevices-Ex.Rout' to 'grDevices-Ex.Rout.save' ... OK Testing examples for package 'graphics' comparing 'graphics-Ex.Rout' to 'graphics-Ex.Rout.save' ... OK Testing examples for package 'stats' comparing 'stats-Ex.Rout' to 'stats-Ex.Rout.save' ... OK Testing examples for package 'datasets' comparing 'datasets-Ex.Rout' to 'datasets-Ex.Rout.save' ... OK Testing examples for package 'methods' Testing examples for package 'grid' comparing 'grid-Ex.Rout' to 'grid-Ex.Rout.save' ... OK Testing examples for package 'splines' comparing 'splines-Ex.Rout' to 'splines-Ex.Rout.save' ... OK Testing examples for package 'stats4' comparing 'stats4-Ex.Rout' to 'stats4-Ex.Rout.save' ... OK Testing examples for package 'tcltk' Testing examples for package 'compiler' Testing examples for package 'parallel' running strict specific tests running code in '/Volumes/Builds/R4/R-4.1-branch/tests/eval-etc.R' ... OK comparing 'eval-etc.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/eval-etc.Rout.save' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/simple-true.R' ... OK comparing 'simple-true.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/simple-true.Rout.save' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/arith-true.R' ... OK comparing 'arith-true.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/arith-true.Rout.save' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/arith.R' ... OK comparing 'arith.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/arith.Rout.save' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/lm-tests.R' ... OK comparing 'lm-tests.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/lm-tests.Rout.save' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/ok-errors.R' ... OK comparing 'ok-errors.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/ok-errors.Rout.save' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/method-dispatch.R' ... OK comparing 'method-dispatch.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/method-dispatch.Rout.save' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/any-all.R' ... OK comparing 'any-all.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/any-all.Rout.save' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/d-p-q-r-tests.R' ... OK comparing 'd-p-q-r-tests.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/d-p-q-r-tests.Rout.save' ... OK running sloppy specific tests running code in '/Volumes/Builds/R4/R-4.1-branch/tests/complex.R' ... OK comparing 'complex.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/complex.Rout.save' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/print-tests.R' ... OK comparing 'print-tests.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/print-tests.Rout.save' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/lapack.R' ... OK comparing 'lapack.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/lapack.Rout.save' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/datasets.R' ... OK comparing 'datasets.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/datasets.Rout.save' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/datetime.R' ... OK comparing 'datetime.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/datetime.Rout.save' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/iec60559.R' ... OK comparing 'iec60559.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/iec60559.Rout.save' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/eval-etc-2.R' ... OK comparing 'eval-etc-2.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/eval-etc-2.Rout.save' ... OK checking Sys.timezone ... running code in '/Volumes/Builds/R4/R-4.1-branch/tests/timezone.R' ... OK running regression tests ... running code in '/Volumes/Builds/R4/R-4.1-branch/tests/array-subset.R' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/reg-tests-1a.R' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/reg-tests-1b.R' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/reg-tests-1c.R' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/reg-tests-1d.R' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/reg-tests-2.R' ... OK comparing 'reg-tests-2.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/reg-tests-2.Rout.save' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/reg-examples1.R' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/reg-examples2.R' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/reg-packages.R' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/p-qbeta-strict-tst.R' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/d-p-q-r-tst-2.R' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/r-strict-tst.R' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/reg-IO.R' ... OK comparing 'reg-IO.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/reg-IO.Rout.save' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/reg-IO2.R' ... OK comparing 'reg-IO2.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/reg-IO2.Rout.save' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/reg-plot.R' ... OK comparing 'reg-plot.pdf' to '/Volumes/Builds/R4/R-4.1-branch/tests/reg-plot.pdf.save' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/reg-S4-examples.R' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/reg-BLAS.R' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/reg-tests-3.R' ... OK comparing 'reg-tests-3.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/reg-tests-3.Rout.save' ... OK running code in '/Volumes/Builds/R4/R-4.1-branch/tests/reg-examples3.R' ... OK comparing 'reg-examples3.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/reg-examples3.Rout.save' ... OK running tests of plotting Latin-1 expect failure or some differences if not in a Latin-1 or UTF-8 locale running code in '/Volumes/Builds/R4/R-4.1-branch/tests/reg-plot-latin1.R' ... FAILED running code in '/Volumes/Builds/R4/R-4.1-branch/tests/reg-S4.R' ... OK comparing 'reg-S4.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/reg-S4.Rout.save' ... OK running tests of Internet functions running code in '/Volumes/Builds/R4/R-4.1-branch/tests/internet.R' ... OK comparing 'internet.Rout' to '/Volumes/Builds/R4/R-4.1-branch/tests/internet.Rout.save' ... OK [[system return code 0x0]]
conf - 2021-11-30 20:31:01.000000000 -0600
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checking whether gettimeofday exists and is declared... yes
checking whether utimes exists and is declared... yes
checking whether times exists and is declared... yes
checking whether gmtime_r exists and is declared... yes
checking whether localtime_r exists and is declared... yes
checking whether nl_langinfo exists and is declared... yes
checking whether access exists and is declared... yes
checking whether chdir exists and is declared... yes
checking whether execv exists and is declared... yes
checking whether ftruncate exists and is declared... yes
checking whether getcwd exists and is declared... yes
checking whether geteuid exists and is declared... yes
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checking whether link exists and is declared... yes
checking whether readlink exists and is declared... yes
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checking whether sysconf exists and is declared... yes
checking whether sched_setaffinity exists and is declared... no
checking whether sched_getaffinity exists and is declared... no
checking whether utime exists and is declared... yes
checking whether utimensat exists and is declared... yes
checking for clock_gettime in -lrt... no
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checking for putenv... yes
checking whether putenv is declared... yes
checking for vasprintf... yes
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checking whether putenv("FOO=") can unset an environment variable... no
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checking whether mkdtemp is declared... yes
checking whether strdup is declared... yes
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checking for library containing connect... none required
checking for library containing gethostbyname... none required
checking for library containing xdr_string... none required
checking for working calloc... yes
checking for working isfinite... yes
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checking whether csin exists and is declared... yes
checking whether ctan exists and is declared... yes
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checking whether ccosh exists and is declared... yes
checking whether csinh exists and is declared... yes
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checking for iconv... in libiconv
checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes
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checking for wchar.h... (cached) yes
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checking for X... libraries /opt/X11/lib, headers /opt/X11/include
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checking for gethostbyname... yes
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using X11 ... yes
checking for KeySym... yes
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checking for XmuInternAtom in -lXmu... yes
checking whether pkg-config knows about cairo and pango... no
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configure: using static cairo
checking whether cairo is >= 1.2 and works... yes
checking for CFStringGetSystemEncoding in CoreFoundation framework... -framework CoreFoundation
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checking for tcl.h... yes
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checking for BZ2_bzlibVersion in -lbz2... yes
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checking if PCRE2 has Unicode support... yes
checking whether PCRE support suffices... yes
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checking libcurl version ... 7.64.1
checking for curl/curl.h... yes
checking if libcurl is version 7 and >= 7.28.0... yes
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checking whether leap seconds are treated according to POSIX... yes
checking for inline... inline
checking for struct stat.st_atim.tv_nsec... no
checking for struct stat.st_atimespec.tv_nsec... yes
checking for setitimer... yes
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checking for lpr... lpr
checking for paperconf... false
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checking for gfortran -mmacosx-version-min=10.13 option to support OpenMP... (cached) -fopenmp
checking for recommended packages... yes
checking whether NLS is requested... yes

Configuring src/extra/intl directory
checking for a race-free mkdir -p... /Volumes/Builds/R4/R-4.1-branch/tools/install-sh -c -d
checking whether we are using the GNU C Library 2 or newer... no
checking for ranlib... (cached) ranlib
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checking for stdint.h... yes
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checking whether the inttypes.h PRIxNN macros are broken... no
checking for ld used by clang -mmacosx-version-min=10.13... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no
checking for shared library run path origin... done
checking whether imported symbols can be declared weak... no
checking for multithread API to use... none
checking for argz.h... no
checking for inttypes.h... (cached) yes
checking for limits.h... (cached) yes
checking for unistd.h... (cached) yes
checking for sys/param.h... (cached) yes
checking for getcwd... yes
checking for getegid... yes
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checking for mempcpy... (cached) no
checking for munmap... yes
checking for stpcpy... yes
checking for strcasecmp... yes
checking for strdup... (cached) yes
checking for strtoul... yes
checking for tsearch... yes
checking for argz_count... no
checking for argz_stringify... no
checking for argz_next... no
checking for __fsetlocking... no
checking whether feof_unlocked is declared... yes
checking whether fgets_unlocked is declared... no
checking for iconv... (cached) yes
checking for iconv declaration... (cached) 
         extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft);
checking for NL_LOCALE_NAME macro... no
checking for bison... bison
checking version of bison... 2.3, ok
checking for long long int... yes
checking for long double... yes
checking for wchar_t... yes
checking for wint_t... yes
checking for intmax_t... yes
checking whether printf() supports POSIX/XSI format strings... yes
checking whether we are using the GNU C Library 2.1 or newer... no
checking for stdint.h... (cached) yes
checking for SIZE_MAX... yes
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checking for CFPreferencesCopyAppValue... yes
checking for CFLocaleCopyCurrent... yes
checking for ptrdiff_t... yes
checking for stddef.h... yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking for asprintf... yes
checking for fwprintf... yes
checking for putenv... (cached) yes
checking for setenv... yes
checking for setlocale... yes
checking for snprintf... yes
checking for wcslen... yes
checking whether _snprintf is declared... no
checking whether _snwprintf is declared... no
checking whether getc_unlocked is declared... yes
checking for nl_langinfo and CODESET... (cached) yes
checking for LC_MESSAGES... yes
checking for CFPreferencesCopyAppValue... (cached) yes
checking for CFLocaleCopyCurrent... (cached) yes
checking whether included gettext is requested... no
checking for GNU gettext in libc... no
checking for GNU gettext in libintl... no
checking whether to use NLS... yes
checking where the gettext function comes from... included intl directory
Finished configuring src/extra/intl directory

checking whether OpenMP SIMD reduction is supported... no
using as R_SHELL for scripts ... /bin/sh
configure: creating ./config.status
config.status: creating Makeconf
config.status: creating Makefile
config.status: creating doc/Makefile
config.status: creating doc/html/Makefile
config.status: creating doc/manual/Makefile
config.status: creating etc/Makefile
config.status: creating etc/Makeconf
config.status: creating etc/Renviron
config.status: creating etc/javaconf
config.status: creating etc/ldpaths
config.status: creating m4/Makefile
config.status: creating po/Makefile
config.status: creating share/Makefile
config.status: creating src/Makefile
config.status: creating src/appl/Makefile
config.status: creating src/extra/Makefile
config.status: creating src/extra/blas/Makefile
config.status: creating src/extra/intl/Makefile
config.status: creating src/extra/tre/Makefile
config.status: creating src/extra/tzone/Makefile
config.status: creating src/extra/xdr/Makefile
config.status: creating src/include/Makefile
config.status: creating src/include/Rmath.h0
config.status: creating src/include/R_ext/Makefile
config.status: creating src/library/Recommended/Makefile
config.status: creating src/library/Makefile
config.status: creating src/library/base/DESCRIPTION
config.status: creating src/library/base/Makefile
config.status: creating src/library/compiler/DESCRIPTION
config.status: creating src/library/compiler/Makefile
config.status: creating src/library/datasets/DESCRIPTION
config.status: creating src/library/datasets/Makefile
config.status: creating src/library/graphics/DESCRIPTION
config.status: creating src/library/graphics/Makefile
config.status: creating src/library/graphics/src/Makefile
config.status: creating src/library/grDevices/DESCRIPTION
config.status: creating src/library/grDevices/Makefile
config.status: creating src/library/grDevices/src/Makefile
config.status: creating src/library/grDevices/src/cairo/Makefile
config.status: creating src/library/grid/DESCRIPTION
config.status: creating src/library/grid/Makefile
config.status: creating src/library/grid/src/Makefile
config.status: creating src/library/methods/DESCRIPTION
config.status: creating src/library/methods/Makefile
config.status: creating src/library/methods/src/Makefile
config.status: creating src/library/parallel/DESCRIPTION
config.status: creating src/library/parallel/Makefile
config.status: creating src/library/parallel/src/Makefile
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config.status: creating src/library/stats/DESCRIPTION
config.status: creating src/library/stats/Makefile
config.status: creating src/library/stats/src/Makefile
config.status: creating src/library/stats4/DESCRIPTION
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config.status: creating src/library/splines/DESCRIPTION
config.status: creating src/library/splines/Makefile
config.status: creating src/library/splines/src/Makefile
config.status: creating src/library/tcltk/DESCRIPTION
config.status: creating src/library/tcltk/Makefile
config.status: creating src/library/tcltk/src/Makefile
config.status: creating src/library/tools/DESCRIPTION
config.status: creating src/library/tools/Makefile
config.status: creating src/library/tools/src/Makefile
config.status: creating src/library/translations/DESCRIPTION
config.status: creating src/library/translations/Makefile
config.status: creating src/library/utils/DESCRIPTION
config.status: creating src/library/utils/Makefile
config.status: creating src/library/utils/src/Makefile
config.status: creating src/main/Makefile
config.status: creating src/modules/Makefile
config.status: creating src/modules/X11/Makefile
config.status: creating src/modules/internet/Makefile
config.status: creating src/modules/lapack/Makefile
config.status: creating src/nmath/Makefile
config.status: creating src/nmath/standalone/Makefile
config.status: creating src/scripts/Makefile
config.status: creating src/scripts/R.sh
config.status: creating src/scripts/Rcmd
config.status: creating src/scripts/javareconf
config.status: creating src/scripts/mkinstalldirs
config.status: creating src/scripts/pager
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config.status: creating src/unix/Makefile
config.status: creating tests/Makefile
config.status: creating tests/Embedding/Makefile
config.status: creating tests/Examples/Makefile
config.status: creating tools/Makefile
config.status: creating src/include/config.h
config.status: executing libtool commands
config.status: executing stamp-h commands

R is now configured for x86_64-apple-darwin17.0

  Source directory:            /Volumes/Builds/R4/R-4.1-branch
  Installation directory:      /Library/Frameworks

  C compiler:                  clang -mmacosx-version-min=10.13  -Wall -g -O2
  Fortran fixed-form compiler: gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -Wall -g -O2

  Default C++ compiler:        clang++ -mmacosx-version-min=10.13 -std=gnu++14  -Wall -g -O2
  C++11 compiler:              clang++ -mmacosx-version-min=10.13 -std=gnu++11  -Wall -g -O2
  C++14 compiler:              clang++ -mmacosx-version-min=10.13 -std=gnu++14  -Wall -g -O2
  C++17 compiler:              clang++ -mmacosx-version-min=10.13 -std=gnu++17  -Wall -g -O2
  C++20 compiler:              clang++ -mmacosx-version-min=10.13 -std=gnu++2a  -Wall -g -O2
  Fortran free-form compiler:  gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -Wall -g -O2
  Obj-C compiler:	       clang -mmacosx-version-min=10.13 -Wall -g -O2 -fobjc-exceptions

  Interfaces supported:        X11, aqua, tcltk
  External libraries:          pcre2, readline, curl
  Additional capabilities:     PNG, JPEG, TIFF, NLS, cairo, ICU
  Options enabled:             framework, shared BLAS, R profiling, memory profiling

  Capabilities skipped:        
  Options not enabled:         

  Recommended packages:        yes


[[system return code 0x0]]
build - 2021-11-30 20:35:29.000000000 -0600
creating RESOURCES
creating FAQ
creating doc/html/resources.html
make[1]: Nothing to be done for `R'.
make[1]: Nothing to be done for `R'.
make[2]: Nothing to be done for `R'.
mkdir ../share/R
mkdir ../share/dictionaries
mkdir ../share/encodings
mkdir ../share/java
mkdir ../share/licenses
mkdir ../share/make
mkdir ../share/Rd
mkdir ../share/Rd/macros
mkdir ../share/sh
mkdir ../share/texmf
mkdir ../share/texmf/bibtex
mkdir ../share/texmf/bibtex/bib
mkdir ../share/texmf/bibtex/bst
mkdir ../share/texmf/tex
mkdir ../share/texmf/tex/latex
creating src/scripts/R.fe
mkdir ../../bin
mkdir ../../include
mkdir ../../../include/R_ext
gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC  -Wall -g -O2  -c /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/blas.f -o blas.o
making localtime.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/tzone/localtime.c
making strftime.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/tzone/strftime.c
making regcomp.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/regcomp.c
gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC  -Wall -g -O2  -c /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/cmplxblas.f -o cmplxblas.o
making bindtextdom.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/bindtextdom.c
making regerror.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/regerror.c
making regexec.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/regexec.c
clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/tzone -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -DHAVE_CONFIG_H  -I/System/Library/Frameworks/CoreFoundation.framework/Headers  -fPIC  -Wall -g -O2   -c /Volumes/Builds/R4/R-4.1-branch/src/extra/tzone/localtime.c -o localtime.o
making dcgettext.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/dcgettext.c
making tre-ast.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/tre-ast.c
making tre-compile.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/tre-compile.c
making dgettext.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/dgettext.c
making tre-match-approx.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/tre-match-approx.c
making gettext.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/gettext.c
making tre-match-backtrack.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/tre-match-backtrack.c

/Volumes/Builds/R4/R-4.1-branch/src/extra/blas/cmplxblas.f:4796:26: RTEMP = RTEMP + DCONJG( A( L, J ) )*A( L, J ) 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/cmplxblas.f:4808:26: RTEMP = RTEMP + DCONJG( A( L, J ) )*A( L, J ) 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] making finddomain.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/finddomain.c making tre-match-parallel.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/tre-match-parallel.c making tre-mem.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/tre-mem.c clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/tzone -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/tzone/strftime.c -o strftime.o making loadmsgcat.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/loadmsgcat.c making tre-parse.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/tre-parse.c making textdomain.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/textdomain.c making tre-stack.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/tre-stack.c making l10nflist.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/l10nflist.c making xmalloc.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/xmalloc.c making explodename.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/explodename.c clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra/tre -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/regcomp.c -o regcomp.o making dcigettext.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/dcigettext.c clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra/tre -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/regerror.c -o regerror.o making dcngettext.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/dcngettext.c clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra/tre -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/regexec.c -o regexec.o making dngettext.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/dngettext.c clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra/tre -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/tre-ast.c -o tre-ast.o making ngettext.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/ngettext.c ar -cr libtz.a localtime.o strftime.o making plural.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/plural.c clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra/tre -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/tre-compile.c -o tre-compile.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra/tre -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/tre-match-approx.c -o tre-match-approx.o making plural-exp.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/plural-exp.c making langprefs.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/langprefs.c clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra/tre -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/tre-match-backtrack.c -o tre-match-backtrack.o making localcharset.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/localcharset.c
/Volumes/Builds/R4/R-4.1-branch/src/extra/blas/blas.f:1614:0: DH22=DH22*GAM Warning: 'dh22' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/blas.f:1613:0: DH21=DH21*GAM Warning: 'dh21' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/blas.f:1480:0: 1 DQ2,DU,DY1,ZERO,GAMSQ,DD1,DFLAG,DH12,DH22,DP1,DQ1, Warning: 'dh12' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/blas.f:1590:0: DH11=DH11*GAM Warning: 'dh11' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/tre-match-backtrack.c:429:62: warning: converting the result of '<<' to a boolean; did you mean '(((1 << 1) << 1) << 1) != 0'? [-Wint-in-bool-context] tre_fill_pmatch(bt + 1, pmatch, tnfa->cflags & /*LINTED*/!REG_NOSUB, ^ /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/tre.h:101:32: note: expanded from macro 'REG_NOSUB' #define REG_NOSUB (REG_NEWLINE << 1) ^ /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/cmplxblas.f:1130:0: INTEGER I, INFO, IX, IY, J, JX, JY, KX, KY Warning: 'ky' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/cmplxblas.f:1130:0: Warning: 'kx' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/cmplxblas.f:1130:0: Warning: 'jy' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/cmplxblas.f:1130:0: Warning: 'jx' may be used uninitialized in this function [-Wmaybe-uninitialized] making localename.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/localename.c making printf.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/printf.c making osdep.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/osdep.c making intl-compat.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/intl-compat.c making hash-string.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/hash-string.c
1 warning generated. making lock.d from /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/lock.c clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra/tre -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/tre-match-parallel.c -o tre-match-parallel.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/bindtextdom.c -o bindtextdom.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/dcgettext.c -o dcgettext.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/dgettext.c -o dgettext.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra/tre -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/tre-mem.c -o tre-mem.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/gettext.c -o gettext.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/finddomain.c -o finddomain.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra/tre -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/tre-parse.c -o tre-parse.o
/Volumes/Builds/R4/R-4.1-branch/src/extra/blas/cmplxblas.f:2208:0: INTEGER I, INFO, IX, J, JX, KX Warning: 'kx' may be used uninitialized in this function [-Wmaybe-uninitialized] clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/loadmsgcat.c -o loadmsgcat.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra/tre -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/tre-stack.c -o tre-stack.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/textdomain.c -o textdomain.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra/tre -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/tre/xmalloc.c -o xmalloc.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/l10nflist.c -o l10nflist.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/explodename.c -o explodename.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/dcigettext.c -o dcigettext.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/dcngettext.c -o dcngettext.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/dngettext.c -o dngettext.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/ngettext.c -o ngettext.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/plural.c -o plural.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/plural-exp.c -o plural-exp.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/langprefs.c -o langprefs.o
/Volumes/Builds/R4/R-4.1-branch/src/extra/blas/cmplxblas.f:2946:0: INTEGER I, INFO, IX, J, JX, KX Warning: 'kx' may be used uninitialized in this function [-Wmaybe-uninitialized] clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/localcharset.c -o localcharset.o ar -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o ranlib libtre.a clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/localename.c -o localename.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/printf.c -o printf.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/osdep.c -o osdep.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/intl-compat.c -o intl-compat.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/hash-string.c -o hash-string.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/Volumes/Builds/R4/R-4.1-branch/src/extra/intl -I/usr/local/include -DLOCALEDIR=\"\" -DLOCALEALIAS_PATH=\"\" -DIN_LIBINTL -DHAVE_CONFIG_H -I/System/Library/Frameworks/CoreFoundation.framework/Headers -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/extra/intl/lock.c -o lock.o ar -cr libintl.a bindtextdom.o dcgettext.o dgettext.o gettext.o finddomain.o loadmsgcat.o textdomain.o l10nflist.o explodename.o dcigettext.o dcngettext.o dngettext.o ngettext.o plural.o plural-exp.o langprefs.o localcharset.o localename.o printf.o osdep.o intl-compat.o hash-string.o lock.o
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: libintl.a(printf.o) has no symbols /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: libintl.a(osdep.o) has no symbols /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: libintl.a(lock.o) has no symbols ranlib libintl.a
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: libintl.a(printf.o) has no symbols /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: libintl.a(osdep.o) has no symbols /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: libintl.a(lock.o) has no symbols /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/cmplxblas.f:4386:0: INTEGER I, INFO, IX, J, JX, KX Warning: 'kx' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/cmplxblas.f:5195:0: INTEGER I, INFO, IX, J, JX, K, KK, KX Warning: 'kx' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/cmplxblas.f:5423:0: INTEGER I, INFO, IX, IY, J, JX, JY, K, KK, KX, KY Warning: 'ky' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/cmplxblas.f:5423:0: Warning: 'kx' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/cmplxblas.f:5423:0: Warning: 'jy' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/cmplxblas.f:5423:0: Warning: 'jx' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/cmplxblas.f:6649:0: INTEGER I, INFO, IX, J, JX, KPLUS1, KX, L Warning: 'kx' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/cmplxblas.f:7030:0: INTEGER I, INFO, IX, J, JX, KPLUS1, KX, L Warning: 'kx' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/cmplxblas.f:7367:0: INTEGER I, INFO, IX, J, JX, K, KK, KX Warning: 'kx' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/extra/blas/cmplxblas.f:7708:0: INTEGER I, INFO, IX, J, JX, K, KK, KX Warning: 'kx' may be used uninitialized in this function [-Wmaybe-uninitialized] clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o libRblas.dylib blas.o cmplxblas.o -install_name libRblas.dylib -headerpad_max_install_names -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin18/8.2.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm
ld: warning: dylib (/usr/local/gfortran/lib/libgfortran.dylib) was built for newer macOS version (10.14) than being linked (10.13) ld: warning: dylib (/usr/local/gfortran/lib/libquadmath.dylib) was built for newer macOS version (10.14) than being linked (10.13) #ar -cr libRblas.dylib blas.o cmplxblas.o mkdir /Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib making integrate.d from /Volumes/Builds/R4/R-4.1-branch/src/appl/integrate.c making interv.d from /Volumes/Builds/R4/R-4.1-branch/src/appl/interv.c making maxcol.d from /Volumes/Builds/R4/R-4.1-branch/src/appl/maxcol.c making optim.d from /Volumes/Builds/R4/R-4.1-branch/src/appl/optim.c making pretty.d from /Volumes/Builds/R4/R-4.1-branch/src/appl/pretty.c making uncmin.d from /Volumes/Builds/R4/R-4.1-branch/src/appl/uncmin.c clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/integrate.c -o integrate.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/interv.c -o interv.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/maxcol.c -o maxcol.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/optim.c -o optim.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/pretty.c -o pretty.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/uncmin.c -o uncmin.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/dchdc.f -o dchdc.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/dpbfa.f -o dpbfa.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/dpbsl.f -o dpbsl.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/dpoco.f -o dpoco.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/dpodi.f -o dpodi.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/dpofa.f -o dpofa.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/dposl.f -o dposl.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/dqrdc.f -o dqrdc.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/dqrdc2.f -o dqrdc2.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/dqrls.f -o dqrls.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/dqrsl.f -o dqrsl.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/dqrutl.f -o dqrutl.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/dsvdc.f -o dsvdc.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/dtrco.f -o dtrco.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/appl/dtrsl.f -o dtrsl.o ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o ranlib libappl.a #@/Applications/Xcode.app/Contents/Developer/usr/bin/make install-Linpack making mlutils.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/mlutils.c making d1mach.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/d1mach.c making i1mach.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/i1mach.c making fmax2.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/fmax2.c making fmin2.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/fmin2.c making fprec.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/fprec.c making fround.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/fround.c making ftrunc.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/ftrunc.c making sign.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/sign.c making fsign.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/fsign.c making imax2.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/imax2.c making imin2.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/imin2.c making chebyshev.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/chebyshev.c making log1p.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/log1p.c making lgammacor.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/lgammacor.c making gammalims.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/gammalims.c making stirlerr.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/stirlerr.c making bd0.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/bd0.c making gamma.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/gamma.c making lgamma.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/lgamma.c making gamma_cody.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/gamma_cody.c making beta.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/beta.c making lbeta.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/lbeta.c making polygamma.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/polygamma.c making cospi.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/cospi.c making bessel_i.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/bessel_i.c making bessel_j.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/bessel_j.c making bessel_k.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/bessel_k.c making bessel_y.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/bessel_y.c making choose.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/choose.c making snorm.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/snorm.c making sexp.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/sexp.c making dgamma.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dgamma.c making pgamma.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/pgamma.c making qgamma.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qgamma.c making rgamma.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/rgamma.c making dbeta.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dbeta.c making pbeta.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/pbeta.c making qbeta.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qbeta.c making rbeta.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/rbeta.c making dunif.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dunif.c making punif.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/punif.c making qunif.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qunif.c making runif.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/runif.c making dnorm.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dnorm.c making pnorm.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/pnorm.c making qnorm.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qnorm.c making rnorm.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/rnorm.c making dlnorm.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dlnorm.c making plnorm.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/plnorm.c making qlnorm.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qlnorm.c making rlnorm.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/rlnorm.c making df.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/df.c making pf.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/pf.c making qf.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qf.c making rf.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/rf.c making dnf.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dnf.c making dt.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dt.c making pt.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/pt.c making qt.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qt.c making rt.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/rt.c making dnt.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dnt.c making dchisq.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dchisq.c making pchisq.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/pchisq.c making qchisq.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qchisq.c making rchisq.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/rchisq.c making rnchisq.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/rnchisq.c making dbinom.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dbinom.c making pbinom.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/pbinom.c making qbinom.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qbinom.c making rbinom.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/rbinom.c making rmultinom.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/rmultinom.c making dcauchy.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dcauchy.c making pcauchy.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/pcauchy.c making qcauchy.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qcauchy.c making rcauchy.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/rcauchy.c making dexp.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dexp.c making pexp.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/pexp.c making qexp.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qexp.c making rexp.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/rexp.c making dgeom.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dgeom.c making pgeom.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/pgeom.c making qgeom.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qgeom.c making rgeom.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/rgeom.c making dhyper.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dhyper.c making phyper.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/phyper.c making qhyper.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qhyper.c making rhyper.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/rhyper.c making dnbinom.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dnbinom.c making pnbinom.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/pnbinom.c making qnbinom.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qnbinom.c making qnbinom_mu.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qnbinom_mu.c making rnbinom.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/rnbinom.c making dpois.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dpois.c making ppois.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/ppois.c making qpois.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qpois.c making rpois.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/rpois.c making dweibull.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dweibull.c making pweibull.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/pweibull.c making qweibull.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qweibull.c making rweibull.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/rweibull.c making dlogis.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dlogis.c making plogis.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/plogis.c making qlogis.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qlogis.c making rlogis.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/rlogis.c making dnchisq.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dnchisq.c making pnchisq.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/pnchisq.c making qnchisq.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qnchisq.c making dnbeta.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/dnbeta.c making pnbeta.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/pnbeta.c making qnbeta.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qnbeta.c making pnf.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/pnf.c making pnt.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/pnt.c making qnf.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qnf.c making qnt.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qnt.c making ptukey.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/ptukey.c making qtukey.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/qtukey.c making toms708.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/toms708.c making wilcox.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/wilcox.c making signrank.d from /Volumes/Builds/R4/R-4.1-branch/src/nmath/signrank.c clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/mlutils.c -o mlutils.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/d1mach.c -o d1mach.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/i1mach.c -o i1mach.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/fmax2.c -o fmax2.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/fmin2.c -o fmin2.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/fprec.c -o fprec.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/fround.c -o fround.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/ftrunc.c -o ftrunc.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/sign.c -o sign.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/fsign.c -o fsign.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/imax2.c -o imax2.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/imin2.c -o imin2.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/chebyshev.c -o chebyshev.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/log1p.c -o log1p.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/lgammacor.c -o lgammacor.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/gammalims.c -o gammalims.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/stirlerr.c -o stirlerr.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/bd0.c -o bd0.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/gamma.c -o gamma.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/lgamma.c -o lgamma.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/gamma_cody.c -o gamma_cody.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/beta.c -o beta.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/lbeta.c -o lbeta.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/polygamma.c -o polygamma.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/cospi.c -o cospi.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/bessel_i.c -o bessel_i.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/bessel_j.c -o bessel_j.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/bessel_k.c -o bessel_k.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/bessel_y.c -o bessel_y.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/choose.c -o choose.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/snorm.c -o snorm.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/sexp.c -o sexp.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/dgamma.c -o dgamma.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/pgamma.c -o pgamma.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/qgamma.c -o qgamma.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/rgamma.c -o rgamma.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/dbeta.c -o dbeta.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/pbeta.c -o pbeta.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/qbeta.c -o qbeta.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/rbeta.c -o rbeta.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/dunif.c -o dunif.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/punif.c -o punif.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/qunif.c -o qunif.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/runif.c -o runif.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/dnorm.c -o dnorm.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/pnorm.c -o pnorm.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC 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-I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/dnbeta.c -o dnbeta.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/pnbeta.c -o pnbeta.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/qnbeta.c -o qnbeta.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/pnf.c -o pnf.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/pnt.c -o pnt.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/qnf.c -o qnf.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/qnt.c -o qnt.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/ptukey.c -o ptukey.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/qtukey.c -o qtukey.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/toms708.c -o toms708.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/wilcox.c -o wilcox.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/nmath/signrank.c -o signrank.o ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o qnbinom_mu.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: libnmath.a(mlutils.o) has no symbols /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: libnmath.a(log1p.o) has no symbols ranlib libnmath.a
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: libnmath.a(mlutils.o) has no symbols /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: libnmath.a(log1p.o) has no symbols config.status: creating src/unix/Makefile making Rembedded.d from /Volumes/Builds/R4/R-4.1-branch/src/unix/Rembedded.c making dynload.d from /Volumes/Builds/R4/R-4.1-branch/src/unix/dynload.c making system.d from /Volumes/Builds/R4/R-4.1-branch/src/unix/system.c making sys-unix.d from /Volumes/Builds/R4/R-4.1-branch/src/unix/sys-unix.c making sys-std.d from /Volumes/Builds/R4/R-4.1-branch/src/unix/sys-std.c making X11.d from /Volumes/Builds/R4/R-4.1-branch/src/unix/X11.c clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/opt/X11/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/unix/Rembedded.c -o Rembedded.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/opt/X11/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/unix/dynload.c -o dynload.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/opt/X11/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/unix/system.c -o system.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/opt/X11/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/unix/sys-unix.c -o sys-unix.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/opt/X11/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/unix/sys-std.c -o sys-std.o clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/opt/X11/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/unix/X11.c -o X11.o ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o ranlib libunix.a clang -mmacosx-version-min=10.13 -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/opt/X11/include -I/usr/local/include -DHAVE_CONFIG_H -Wall -g -O2 -L/usr/local/lib -DR_HOME='"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch"' \ -o Rscript /Volumes/Builds/R4/R-4.1-branch/src/unix/Rscript.c config.status: creating src/main/Makefile making CommandLineArgs.d from /Volumes/Builds/R4/R-4.1-branch/src/main/CommandLineArgs.c making Rdynload.d from /Volumes/Builds/R4/R-4.1-branch/src/main/Rdynload.c making Renviron.d from /Volumes/Builds/R4/R-4.1-branch/src/main/Renviron.c making RNG.d from /Volumes/Builds/R4/R-4.1-branch/src/main/RNG.c making agrep.d from /Volumes/Builds/R4/R-4.1-branch/src/main/agrep.c making altclasses.d from /Volumes/Builds/R4/R-4.1-branch/src/main/altclasses.c making altrep.d from /Volumes/Builds/R4/R-4.1-branch/src/main/altrep.c making apply.d from /Volumes/Builds/R4/R-4.1-branch/src/main/apply.c making arithmetic.d from /Volumes/Builds/R4/R-4.1-branch/src/main/arithmetic.c making array.d from /Volumes/Builds/R4/R-4.1-branch/src/main/array.c making attrib.d from /Volumes/Builds/R4/R-4.1-branch/src/main/attrib.c making bind.d from /Volumes/Builds/R4/R-4.1-branch/src/main/bind.c making builtin.d from /Volumes/Builds/R4/R-4.1-branch/src/main/builtin.c making character.d from /Volumes/Builds/R4/R-4.1-branch/src/main/character.c making coerce.d from /Volumes/Builds/R4/R-4.1-branch/src/main/coerce.c making colors.d from /Volumes/Builds/R4/R-4.1-branch/src/main/colors.c making complex.d from /Volumes/Builds/R4/R-4.1-branch/src/main/complex.c making connections.d from /Volumes/Builds/R4/R-4.1-branch/src/main/connections.c making context.d from /Volumes/Builds/R4/R-4.1-branch/src/main/context.c making cum.d from /Volumes/Builds/R4/R-4.1-branch/src/main/cum.c making dcf.d from /Volumes/Builds/R4/R-4.1-branch/src/main/dcf.c making datetime.d from /Volumes/Builds/R4/R-4.1-branch/src/main/datetime.c making debug.d from /Volumes/Builds/R4/R-4.1-branch/src/main/debug.c making deparse.d from /Volumes/Builds/R4/R-4.1-branch/src/main/deparse.c making devices.d from /Volumes/Builds/R4/R-4.1-branch/src/main/devices.c making dotcode.d from /Volumes/Builds/R4/R-4.1-branch/src/main/dotcode.c making dounzip.d from /Volumes/Builds/R4/R-4.1-branch/src/main/dounzip.c making dstruct.d from /Volumes/Builds/R4/R-4.1-branch/src/main/dstruct.c making duplicate.d from /Volumes/Builds/R4/R-4.1-branch/src/main/duplicate.c making edit.d from /Volumes/Builds/R4/R-4.1-branch/src/main/edit.c making engine.d from /Volumes/Builds/R4/R-4.1-branch/src/main/engine.c making envir.d from /Volumes/Builds/R4/R-4.1-branch/src/main/envir.c making errors.d from /Volumes/Builds/R4/R-4.1-branch/src/main/errors.c making eval.d from /Volumes/Builds/R4/R-4.1-branch/src/main/eval.c making format.d from /Volumes/Builds/R4/R-4.1-branch/src/main/format.c making gevents.d from /Volumes/Builds/R4/R-4.1-branch/src/main/gevents.c making gram.d from /Volumes/Builds/R4/R-4.1-branch/src/main/gram.c making gram-ex.d from /Volumes/Builds/R4/R-4.1-branch/src/main/gram-ex.c making graphics.d from /Volumes/Builds/R4/R-4.1-branch/src/main/graphics.c making grep.d from /Volumes/Builds/R4/R-4.1-branch/src/main/grep.c making identical.d from /Volumes/Builds/R4/R-4.1-branch/src/main/identical.c making inlined.d from /Volumes/Builds/R4/R-4.1-branch/src/main/inlined.c making inspect.d from /Volumes/Builds/R4/R-4.1-branch/src/main/inspect.c making internet.d from /Volumes/Builds/R4/R-4.1-branch/src/main/internet.c making iosupport.d from /Volumes/Builds/R4/R-4.1-branch/src/main/iosupport.c making lapack.d from /Volumes/Builds/R4/R-4.1-branch/src/main/lapack.c making list.d from /Volumes/Builds/R4/R-4.1-branch/src/main/list.c making localecharset.d from /Volumes/Builds/R4/R-4.1-branch/src/main/localecharset.c making logic.d from /Volumes/Builds/R4/R-4.1-branch/src/main/logic.c making main.d from /Volumes/Builds/R4/R-4.1-branch/src/main/main.c making mapply.d from /Volumes/Builds/R4/R-4.1-branch/src/main/mapply.c making match.d from /Volumes/Builds/R4/R-4.1-branch/src/main/match.c making memory.d from /Volumes/Builds/R4/R-4.1-branch/src/main/memory.c making names.d from /Volumes/Builds/R4/R-4.1-branch/src/main/names.c making objects.d from /Volumes/Builds/R4/R-4.1-branch/src/main/objects.c making options.d from /Volumes/Builds/R4/R-4.1-branch/src/main/options.c making paste.d from /Volumes/Builds/R4/R-4.1-branch/src/main/paste.c making patterns.d from /Volumes/Builds/R4/R-4.1-branch/src/main/patterns.c making platform.d from /Volumes/Builds/R4/R-4.1-branch/src/main/platform.c making plot.d from /Volumes/Builds/R4/R-4.1-branch/src/main/plot.c making plot3d.d from /Volumes/Builds/R4/R-4.1-branch/src/main/plot3d.c making plotmath.d from /Volumes/Builds/R4/R-4.1-branch/src/main/plotmath.c making print.d from /Volumes/Builds/R4/R-4.1-branch/src/main/print.c making printarray.d from /Volumes/Builds/R4/R-4.1-branch/src/main/printarray.c making printvector.d from /Volumes/Builds/R4/R-4.1-branch/src/main/printvector.c making printutils.d from /Volumes/Builds/R4/R-4.1-branch/src/main/printutils.c making qsort.d from /Volumes/Builds/R4/R-4.1-branch/src/main/qsort.c making radixsort.d from /Volumes/Builds/R4/R-4.1-branch/src/main/radixsort.c making random.d from /Volumes/Builds/R4/R-4.1-branch/src/main/random.c making raw.d from /Volumes/Builds/R4/R-4.1-branch/src/main/raw.c making registration.d from /Volumes/Builds/R4/R-4.1-branch/src/main/registration.c making relop.d from /Volumes/Builds/R4/R-4.1-branch/src/main/relop.c making rlocale.d from /Volumes/Builds/R4/R-4.1-branch/src/main/rlocale.c making saveload.d from /Volumes/Builds/R4/R-4.1-branch/src/main/saveload.c making scan.d from /Volumes/Builds/R4/R-4.1-branch/src/main/scan.c making seq.d from /Volumes/Builds/R4/R-4.1-branch/src/main/seq.c making serialize.d from /Volumes/Builds/R4/R-4.1-branch/src/main/serialize.c making sort.d from /Volumes/Builds/R4/R-4.1-branch/src/main/sort.c making source.d from /Volumes/Builds/R4/R-4.1-branch/src/main/source.c making split.d from /Volumes/Builds/R4/R-4.1-branch/src/main/split.c making sprintf.d from /Volumes/Builds/R4/R-4.1-branch/src/main/sprintf.c making startup.d from /Volumes/Builds/R4/R-4.1-branch/src/main/startup.c making subassign.d from /Volumes/Builds/R4/R-4.1-branch/src/main/subassign.c making subscript.d from /Volumes/Builds/R4/R-4.1-branch/src/main/subscript.c making subset.d from /Volumes/Builds/R4/R-4.1-branch/src/main/subset.c making summary.d from /Volumes/Builds/R4/R-4.1-branch/src/main/summary.c making sysutils.d from /Volumes/Builds/R4/R-4.1-branch/src/main/sysutils.c making times.d from /Volumes/Builds/R4/R-4.1-branch/src/main/times.c making unique.d from /Volumes/Builds/R4/R-4.1-branch/src/main/unique.c making util.d from /Volumes/Builds/R4/R-4.1-branch/src/main/util.c making version.d from /Volumes/Builds/R4/R-4.1-branch/src/main/version.c making g_alab_her.d from /Volumes/Builds/R4/R-4.1-branch/src/main/g_alab_her.c making g_cntrlify.d from /Volumes/Builds/R4/R-4.1-branch/src/main/g_cntrlify.c making g_fontdb.d from /Volumes/Builds/R4/R-4.1-branch/src/main/g_fontdb.c making g_her_glyph.d from /Volumes/Builds/R4/R-4.1-branch/src/main/g_her_glyph.c making Rmain.d from /Volumes/Builds/R4/R-4.1-branch/src/main/Rmain.c making alloca.d from /Volumes/Builds/R4/R-4.1-branch/src/main/alloca.c making mkdtemp.d from /Volumes/Builds/R4/R-4.1-branch/src/main/mkdtemp.c making strdup.d from /Volumes/Builds/R4/R-4.1-branch/src/main/strdup.c making strncasecmp.d from /Volumes/Builds/R4/R-4.1-branch/src/main/strncasecmp.c clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/CommandLineArgs.c -o CommandLineArgs.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/Rdynload.c -o Rdynload.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/Renviron.c -o Renviron.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/RNG.c -o RNG.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/agrep.c -o agrep.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c 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arithmetic.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/array.c -o array.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/attrib.c -o attrib.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/bind.c -o bind.o clang -mmacosx-version-min=10.13 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engine.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/envir.c -o envir.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/errors.c -o errors.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/eval.c -o eval.o clang -mmacosx-version-min=10.13 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-I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/subset.c -o subset.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/summary.c -o summary.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/sysutils.c -o sysutils.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/times.c -o times.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/unique.c -o unique.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/util.c -o util.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/version.c -o version.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/g_alab_her.c -o g_alab_her.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/g_cntrlify.c -o g_cntrlify.o clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include 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array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o patterns.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/tre/libtre.a ../extra/intl/libintl.a ../extra/tzone/libtz.a -L"../../lib" -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin18/8.2.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -Wl,-framework -Wl,CoreFoundation -lreadline -lncurses -L/usr/local/lib -lpcre2-8 -llzma -lbz2 -lz -licucore -ldl -lm -liconv
ld: warning: dylib (/usr/local/gfortran/lib/libquadmath.dylib) was built for newer macOS version (10.14) than being linked (10.13) ld: warning: dylib (/usr/local/gfortran/lib/libgfortran.dylib) was built for newer macOS version (10.14) than being linked (10.13) mkdir /Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/bin/exec clang -mmacosx-version-min=10.13 -I/Volumes/Builds/R4/R-4.1-branch/src/extra -I. -I../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -I/Volumes/Builds/R4/R-4.1-branch/src/nmath -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/main/Rmain.c -o Rmain.o clang -mmacosx-version-min=10.13 -L"../../lib" -L/usr/local/lib -o R.bin Rmain.o -lR -lRblas making Lapack.d from /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/Lapack.c making devX11.d from /Volumes/Builds/R4/R-4.1-branch/src/modules/X11/devX11.c making Rhttpd.d from /Volumes/Builds/R4/R-4.1-branch/src/modules/internet/Rhttpd.c making Rsock.d from /Volumes/Builds/R4/R-4.1-branch/src/modules/internet/Rsock.c making rotated.d from /Volumes/Builds/R4/R-4.1-branch/src/modules/X11/rotated.c making rbitmap.d from /Volumes/Builds/R4/R-4.1-branch/src/modules/X11/rbitmap.c making internet.d from /Volumes/Builds/R4/R-4.1-branch/src/modules/internet/internet.c making libcurl.d from /Volumes/Builds/R4/R-4.1-branch/src/modules/internet/libcurl.c making nanoftp.d from /Volumes/Builds/R4/R-4.1-branch/src/modules/internet/nanoftp.c making nanohttp.d from /Volumes/Builds/R4/R-4.1-branch/src/modules/internet/nanohttp.c gfortran -mmacosx-version-min=10.13 -fPIC -Wall -g -O2 -msse2 -mfpmath=sse -c /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlamch.f -o dlamch.o clang -mmacosx-version-min=10.13 -I/usr/local/include/libpng16 -I/usr/local/include -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/opt/X11/include -I/usr/local/include/cairo -I/usr/X11/include -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include -I/usr/local/include/libxml2 -I/usr/local/include/freetype2 -I/usr/local/include/libpng16 -I/Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/modules/X11/devX11.c -o devX11.o making sock.d from /Volumes/Builds/R4/R-4.1-branch/src/modules/internet/sock.c gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f -o dlapack.o making sockconn.d from /Volumes/Builds/R4/R-4.1-branch/src/modules/internet/sockconn.c clang -mmacosx-version-min=10.13 -I/usr/local/include/libpng16 -I/usr/local/include -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/opt/X11/include -I/usr/local/include/cairo -I/usr/X11/include -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include -I/usr/local/include/libxml2 -I/usr/local/include/freetype2 -I/usr/local/include/libpng16 -I/Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/modules/X11/rotated.c -o rotated.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f -o cmplx.o clang -mmacosx-version-min=10.13 -I/usr/local/include/libpng16 -I/usr/local/include -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/opt/X11/include -I/usr/local/include/cairo -I/usr/X11/include -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include -I/usr/local/include/libxml2 -I/usr/local/include/freetype2 -I/usr/local/include/libpng16 -I/Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/modules/X11/rbitmap.c -o rbitmap.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/modules/internet/Rhttpd.c -o Rhttpd.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/modules/internet/Rsock.c -o Rsock.o clang -mmacosx-version-min=10.13 -I/usr/local/include/libpng16 -I/usr/local/include -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/opt/X11/include -I/usr/local/include/cairo -I/usr/X11/include -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include -I/usr/local/include/libxml2 -I/usr/local/include/freetype2 -I/usr/local/include/libpng16 -I/Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/modules/X11/dataentry.c -o dataentry.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/modules/internet/internet.c -o internet.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/modules/internet/libcurl.c -o libcurl.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/modules/internet/nanoftp.c -o nanoftp.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/modules/internet/nanohttp.c -o nanohttp.o
/Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:1780:19: K = SCALE( I ) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:1794:19: K = SCALE( I ) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:2456:21: D( I ) = ALPHA 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:2475:24: E( I ) = ALPHA 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:2500:21: D( I ) = ALPHA 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:2519:24: E( I ) = ALPHA 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:21724:21: D( I ) = ALPHA 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:21764:24: E( I ) = ALPHA 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:21808:21: D( I ) = ALPHA 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:21842:24: E( I ) = ALPHA 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:3759:21: HSWORK = WORK( 1 ) 1 Warning: Possible change of value in conversion from COMPLEX(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:51010:18: LWKOPT = WORK( 1 ) 1 Warning: Possible change of value in conversion from COMPLEX(8) to INTEGER(4) at (1) [-Wconversion] clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/modules/internet/sock.c -o sock.o
/Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:18896:18: W( 1 ) = A( 1, 1 ) 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:38222:26: E( I-1 ) = ALPHA 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:38276:24: E( I ) = ALPHA 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:20030:24: D( J ) = A( J, J ) 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:19616:21: E( I ) = ALPHA 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:19644:23: D( I+1 ) = A( I+1, I+1 ) 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:19647:18: D( 1 ) = A( 1, 1 ) 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:19660:21: E( I ) = ALPHA 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:19689:21: D( I ) = A( I, I ) 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:19692:18: D( N ) = A( N, N ) 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:20062:24: D( J ) = A( J, J ) 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:19287:18: W( 1 ) = A( 1, 1 ) 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:39440:18: AII = A( I, I ) 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:39459:18: AII = A( I, I ) 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:39881:18: AJJ = DBLE( A( J, J ) ) - ZDOTC( J-1, A( 1, J ), 1, 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:39908:18: AJJ = DBLE( A( J, J ) ) - ZDOTC( J-1, A( J, 1 ), LDA, 1 Warning: Possible change of value in conversion from COMPLEX(8) to REAL(8) at (1) [-Wconversion] clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/modules/internet/sockconn.c -o sockconn.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L"../../../lib" -L/usr/local/lib -o R_X11.so devX11.o rotated.o rbitmap.o -L/usr/local/lib -ltiff -L/usr/local/lib -ljpeg -L/usr/local/lib -lpng16 -lz -lSM -lICE -L/usr/X11/lib -L/usr/local/lib -L/usr/X11/lib -L/usr/local/lib -lz -lSM -lICE -lX11 -lXext -lcairo -lz -lXrender -lSM -lICE -lX11 -lXext -lpixman-1 -lfontconfig -lxml2 -lpthread -lz -llzma -liconv -lm -lfreetype -lbz2 -lpng16 -lz -L/opt/X11/lib -lX11 -lXt -lXmu -lR -Wl,-framework -Wl,CoreFoundation clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L"../../../lib" -L/usr/local/lib -o internet.so Rhttpd.o Rsock.o internet.o libcurl.o nanoftp.o nanohttp.o sock.o sockconn.o -lcurl -lR -Wl,-framework -Wl,CoreFoundation mkdir /Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/modules clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L"../../../lib" -L/usr/local/lib -o R_de.so dataentry.o -lSM -lICE -L/usr/X11/lib -L/usr/local/lib -L/usr/X11/lib -L/usr/local/lib -lz -lSM -lICE -lX11 -lXext -lcairo -lz -lXrender -lSM -lICE -lX11 -lXext -lpixman-1 -lfontconfig -lxml2 -lpthread -lz -llzma -liconv -lm -lfreetype -lbz2 -lpng16 -lz -L/opt/X11/lib -lX11 -lXt -lXmu -lR -Wl,-framework -Wl,CoreFoundation
/Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:42313:0: INTEGER I, INFO, IX, J, JX, KX Warning: 'kx' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:42941:0: $ CALL ZSWAP( N-KP, A( KP+1, KK ), 1, A( KP+1, KP ), 1 ) Warning: 'imax' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:23899:0: INTEGER I, IMAX, J, JLAM, JMAX, JP, K2, N1, N1P1, N2 Warning: 'jlam' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:28093:0: DOUBLE PRECISION SUM, VALUE Warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:27577:0: DOUBLE PRECISION ABSA, SUM, VALUE Warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:6965:19: K = SCALE( I ) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:6979:19: K = SCALE( I ) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:9255:21: HSWORK = WORK( 1 ) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:9870:21: HSWORK = WORK( 1 ) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:16900:28: LWORK_DGEQRF=DUM(1) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:16904:28: LWORK_DORMQR=DUM(1) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:16919:28: LWORK_DGEBRD=DUM(1) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:16923:28: LWORK_DORMBR=DUM(1) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:98805:18: LWKOPT = WORK( 1 ) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:16927:28: LWORK_DORGBR=DUM(1) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:16951:31: LWORK_DGELQF=DUM(1) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:16955:31: LWORK_DGEBRD=DUM(1) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:16959:31: LWORK_DORMBR=DUM(1) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:16963:31: LWORK_DORGBR=DUM(1) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:16967:31: LWORK_DORMLQ=DUM(1) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:16987:31: LWORK_DGEBRD=DUM(1) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:16991:31: LWORK_DORMBR=DUM(1) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:16995:31: LWORK_DORGBR=DUM(1) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:36578:13: LOPT = WORK( 1 ) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:35520:13: LOPT = WORK( M+NP+1 ) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:36876:13: LOPT = WORK( 1 ) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:36224:13: LOPT = WORK( P+MN+1 ) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:124474:14: LWMIN = MAX( DBLE( LWMIN ), DBLE( WORK( 1 ) ) ) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:124475:15: LIWMIN = MAX( DBLE( LIWMIN ), DBLE( IWORK( 1 ) ) ) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:137193:13: LOPT = MAX( DBLE( LOPT ), DBLE( WORK( 1 ) ) ) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:137194:14: LIOPT = MAX( DBLE( LIOPT ), DBLE( IWORK( 1 ) ) ) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:138372:21: LWKOPT = WORK(1) 1 Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:78161:34: SUBROUTINE DLARRV( N, VL, VU, D, L, PIVMIN, 1 Warning: Unused dummy argument 'vu' at (1) [-Wunused-dummy-argument] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:74644:54: SUBROUTINE DLARRC( JOBT, N, VL, VU, D, E, PIVMIN, 1 Warning: Unused dummy argument 'pivmin' at (1) [-Wunused-dummy-argument] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:46417:45: $ RELTOL, PIVMIN, D, E, E2, NVAL, AB, C, MOUT, 1 Warning: Unused dummy argument 'e' at (1) [-Wunused-dummy-argument] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:44477:0: IF( ILBACK ) THEN Warning: 'ilback' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:44353:0: IF( ILALL ) THEN Warning: 'ilall' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:58843:55: INTEGER FUNCTION DLANEG( N, D, LLD, SIGMA, PIVMIN, R ) 1 Warning: Unused dummy argument 'pivmin' at (1) [-Wunused-dummy-argument] SRC/iparam2stage.F:612:68: Warning: Unused dummy argument 'lwork' at (1) [-Wunused-dummy-argument] SRC/iparam2stage.F:612:51: Warning: Unused dummy argument 'n' at (1) [-Wunused-dummy-argument] SRC/iparam2stage.F:612:48: Warning: Unused dummy argument 'opts' at (1) [-Wunused-dummy-argument] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:129267:23: $ ABSTOL, M, W, Z, LDZ, ISUPPZ, WORK, LWORK, IWORK, 1 Warning: Unused dummy argument 'abstol' at (1) [-Wunused-dummy-argument] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:27345:0: DOUBLE PRECISION SUM, VALUE, TEMP Warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:15060:0: A( N, N ) = DCMPLX( SMIN, ZERO ) Warning: 'smin' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:15042:0: $ CALL ZSWAP( N, A( 1, JPV ), 1, A( 1, I ), 1 ) Warning: 'jpv' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:15036:0: $ CALL ZSWAP( N, A( IPV, 1 ), LDA, A( I, 1 ), LDA ) Warning: 'ipv' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:27841:0: DOUBLE PRECISION SUM, VALUE Warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:20932:0: IF( ILZ ) Warning: 'ilz' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:20874:0: IF( ILQ ) THEN Warning: 'ilq' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:20766:0: IF( .NOT.ILSCHR ) THEN Warning: 'ilschr' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:25730:0: $ DIFRJ ) / ( POLES( I, 2 )+DJ ) Warning: 'difrj' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:24670:0: $ CALL ZSCAL( I2-I, DCONJG( TEMP ), H( I, I+1 ), LDH ) Warning: 'i2' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:95440:0: X( J ) = X( J ) / TJJS - SUMJ Warning: 'tjjs' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:25007:0: A( K+NB, NB ) = EI Warning: 'IMAGPART_EXPR ' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:25007:0: Warning: 'REALPART_EXPR ' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:47052:0: SCALE = SCALE2 Warning: 'scale2' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:94315:0: X( J ) = X( J ) / TJJS - SUMJ Warning: 'tjjs' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:93199:0: X( J ) = X( J ) / TJJS - SUMJ Warning: 'tjjs' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:49135:0: WORK( 1 ) = LWMIN Warning: 'lwmin' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:55339:0: IF( LWORK.LT.NW*NB+TSIZE ) THEN Warning: 'nb' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:52066:0: IWS = LDWORK*NB Warning: 'nb' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:139859:0: $ CALL DSWAP( N-KP, A( KP+1, KK ), 1, A( KP+1, KP ), 1 ) Warning: 'imax' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:61481:0: DOUBLE PRECISION ANORM, SCALE, SUM Warning: 'anorm' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:126879:0: IPIV( K ) = KP Warning: 'kp' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:126573:0: ELSE IF( ABS( AP( KPC+IMAX-1 ) ).GE.ALPHA*ROWMAX ) THEN Warning: 'imax' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:4925:0: DO 40 I = ILO, IHI - 1 - NX, NB Warning: 'nx' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:6491:0: ELSE IF( N.GE.MNTHR .AND. LWORK.GE.4*M+M*M+ Warning: 'mnthr' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:10775:0: $ NRVT, WRKBL Warning: 'wrkbl' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:12704:0: IF( N.GE.MNTHR ) THEN Warning: 'mnthr' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:14676:0: ROWCND = MAX( RCMIN, SMLNUM ) / MIN( RCMAX, BIGNUM ) Warning: 'smlnum' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:14676:0: Warning: 'bignum' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:155330:0: $ AP( JCLAST ), AP( JC+1 ), 1 ) Warning: 'jclast' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/cmplx.f:52857:0: IWS = LDWORK*NB Warning: 'nb' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:80191:0: ISEED( 4 ) = IT4 Warning: 'it4' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:80190:0: ISEED( 3 ) = IT3 Warning: 'it3' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:80189:0: ISEED( 2 ) = IT2 Warning: 'it2' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:80188:0: ISEED( 1 ) = IT1 Warning: 'it1' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:129505:0: INTEGER B1, BLKSIZ, BN, GPIND, I, IINFO, INDRV1, Warning: 'gpind' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:129694:0: IF( ABS( XJ-XJM ).GT.ORTOL ) Warning: 'ortol' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:129694:0: Warning: 'xjm' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:129714:0: IF( NRM.LT.DTPCRT ) Warning: 'dtpcrt' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:129680:0: $ ABS( WORK( INDRV1+JMAX ) ) Warning: 'onenrm' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:62731:0: DOUBLE PRECISION SUM, VALUE Warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:62336:0: DOUBLE PRECISION SUM, VALUE Warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:61972:0: DOUBLE PRECISION SUM, VALUE Warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:61690:0: DOUBLE PRECISION ABSA, SUM, VALUE Warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:61213:0: DOUBLE PRECISION ABSA, SUM, VALUE Warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:59985:0: DOUBLE PRECISION ABSA, SUM, VALUE Warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:50542:0: INTEGER I, IMAX, J, JLAM, JMAX, JP, K2, N1, N1P1, N2 Warning: 'jlam' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:49858:0: $ TAU = TAU*SCLINV Warning: 'sclinv' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:47698:0: $ N2, NJ, PJ Warning: 'pj' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:59748:0: DOUBLE PRECISION SUM, VALUE Warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:59537:0: DOUBLE PRECISION ANORM, SCALE, SUM, TEMP Warning: 'anorm' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:59325:0: DOUBLE PRECISION SUM, VALUE, TEMP Warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:30198:0: A( N, N ) = SMIN Warning: 'smin' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:30180:0: $ CALL DSWAP( N, A( 1, JPV ), 1, A( 1, I ), 1 ) Warning: 'jpv' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:30174:0: $ CALL DSWAP( N, A( IPV, 1 ), LDA, A( I, 1 ), LDA ) Warning: 'ipv' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:57445:0: $ DIFRJ ) / ( POLES( I, 2 )+DJ ) Warning: 'difrj' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:43297:0: IF( ILZ ) THEN Warning: 'ilz' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:43232:0: IF( ILQ ) THEN Warning: 'ilq' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:42666:0: IF( .NOT.ILSCHR ) THEN Warning: 'ilschr' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:91527:0: IF( JPSV.NE.I ) Warning: 'jpsv' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:91521:0: IF( IPSV.NE.I ) THEN Warning: 'ipsv' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:147326:0: IF( ILBACK ) THEN Warning: 'ilback' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:55334:0: IF( I2.GT.I ) Warning: 'i2' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:55662:0: A( K+NB, NB ) = EI Warning: 'ei' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:160237:0: WORK( 1 ) = LWMIN Warning: 'lwmin' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:160231:0: ELSE IF( LIWORK.LT.LIWMIN .AND. .NOT.LQUERY ) THEN Warning: 'liwmin' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:59100:0: DOUBLE PRECISION SUM, VALUE, TEMP Warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:85479:0: INTEGER I, IDXI, IDXJ, IDXJP, J, JP, JPREV, K2, M, N, Warning: 'jprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:86073:0: $ / ( DSIGMA( I )+DJ ) Warning: 'difrj' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:82631:0: INTEGER CT, I, IDXI, IDXJ, IDXJP, J, JP, JPREV, K2, M, Warning: 'jprev' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:89020:0: TAU = S Warning: 's' may be used uninitialized in this function [-Wmaybe-uninitialized] SRC/iparam2stage.F:770:0: Warning: 'ns' may be used uninitialized in this function [-Wmaybe-uninitialized] SRC/iparam2stage.F:761:0: Warning: 'nh' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:128420:0: ELSE IF( W( JE ).GE.WUL .AND. IDISCU.GT.0 ) THEN Warning: 'wul' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:128418:0: IF( W( JE ).LE.WLU .AND. IDISCL.GT.0 ) THEN Warning: 'wlu' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:46944:0: $ IGIVPT, INDXQ, IPERM, IPRMPT, IQ, IQPTR, IWREM, Warning: 'iwrem' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:46944:0: Warning: 'iqptr' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:47071:0: $ INFO ) Warning: 'iq' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:46944:0: $ IGIVPT, INDXQ, IPERM, IPRMPT, IQ, IQPTR, IWREM, Warning: 'iprmpt' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:46944:0: Warning: 'iperm' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:46944:0: Warning: 'igivpt' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:46943:0: INTEGER CURLVL, CURPRB, CURR, I, IGIVCL, IGIVNM, Warning: 'igivcl' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:103103:0: IF( LWORK.LT.NW*NB+TSIZE ) THEN Warning: 'nb' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:99857:0: IWS = LDWORK*NB Warning: 'nb' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:135933:0: WORK( 1 ) = LWKOPT Warning: 'lwkopt' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:75509:0: IF( W( JE ).GE.WUL .AND. IDISCU.GT.0 ) THEN Warning: 'wul' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:75492:0: IF( W( JE ).LE.WLU .AND. IDISCL.GT.0 ) THEN Warning: 'wlu' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:76030:0: $ ((IRANGE.EQ.VALRNG).AND.(D(1).GT.VL).AND.(D(1).LE.VU)).OR. Warning: 'irange' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:76523:0: WBEGIN = WEND + 1 Warning: 'wend' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:76271:0: IF(MB.EQ.1) THEN Warning: 'mb' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:104360:0: IF( LWORK.LT.NW*NB+TSIZE ) THEN Warning: 'nb' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:22284:0: KK = MIN( K, KI+NB ) Warning: 'nb' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:152534:0: SCALE = SCALE2 Warning: 'scale2' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:150826:0: DIF( KS ) = COND Warning: 'cond' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:1544:0: $ WORK( WSTART ), IWORK, INFO ) Warning: 'z' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:1544:0: Warning: 'poles' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:1544:0: Warning: 'ivt' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:1544:0: Warning: 'is' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:1544:0: Warning: 'ic' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:1544:0: Warning: 'givnum' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:1544:0: Warning: 'givcol' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:1544:0: Warning: 'difr' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:1544:0: Warning: 'difl' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:104730:0: IF( LWORK.LT.NW*NB+TSIZE ) THEN Warning: 'nb' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:163811:0: IWS = LDWORK*NB Warning: 'nb' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:13194:0: DO 40 I = ILO, IHI - 1 - NX, NB Warning: 'nx' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:5484:0: ROWCND = MAX( RCMIN, SMLNUM ) / MIN( RCMAX, BIGNUM ) Warning: 'smlnum' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:5484:0: Warning: 'bignum' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:9798:0: $ MAXWRK, MINWRK Warning: 'maxwrk' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:17180:0: ELSE IF( N.GE.MNTHR .AND. LWORK.GE.4*M+M*M+ Warning: 'mnthr' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:19029:0: KK = MIN( K, KI+NB ) Warning: 'nb' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:27727:0: IF( IE.LT.2 ) THEN Warning: 'ie' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:24495:0: $ NRVT, WRKBL Warning: 'wrkbl' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:26329:0: IF( N.GE.MNTHR ) THEN Warning: 'mnthr' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:24492:0: INTEGER BDSPAC, BLK, CHUNK, I, IE, IERR, IR, ISCL, Warning: 'bdspac' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:29815:0: ROWCND = MAX( RCMIN, SMLNUM ) / MIN( RCMAX, BIGNUM ) Warning: 'smlnum' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:29815:0: Warning: 'bignum' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:55963:0: A( K+NB, NB ) = EI Warning: 'ei' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:60344:0: DOUBLE PRECISION SCALE, S, VALUE, AA, TEMP Warning: 'value' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:98056:0: $ WORK(IORBDB), LORBDBWORK, CHILDINFO ) Warning: 'itauq2' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:98056:0: Warning: 'itauq1' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:98056:0: Warning: 'itaup2' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:98056:0: Warning: 'itaup1' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:98113:0: $ WORK(IORGQR), LORGQRWORK, INFO ) Warning: 'iorgqr' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:98090:0: $ WORK(IORGLQ), LORGLQWORK, INFO ) Warning: 'iorglq' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:98056:0: $ WORK(IORBDB), LORBDBWORK, CHILDINFO ) Warning: 'iorbdb' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:98130:0: $ WORK(IB22E), WORK(IBBCSD), LBBCSDWORK, INFO ) Warning: 'ibbcsd' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:98130:0: Warning: 'ib22e' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:98130:0: Warning: 'ib22d' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:98130:0: Warning: 'ib21e' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:98130:0: Warning: 'ib21d' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:98130:0: Warning: 'ib12e' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:98130:0: Warning: 'ib12d' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:98130:0: Warning: 'ib11e' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:98130:0: Warning: 'ib11d' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:100645:0: IWS = LDWORK*NB Warning: 'nb' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:107059:0: SCOND = MAX( SMIN, SMLNUM ) / MIN( SMAX, BIGNUM ) Warning: 'smlnum' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:107059:0: Warning: 'bignum' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:110946:0: SCOND = MAX( SMIN, SMLNUM ) / MIN( SMAX, BIGNUM ) Warning: 'smlnum' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:110946:0: Warning: 'bignum' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:113627:0: SCOND = MAX( SMIN, SMLNUM ) / MIN( SMAX, BIGNUM ) Warning: 'smlnum' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/dlapack.f:113627:0: Warning: 'bignum' may be used uninitialized in this function [-Wmaybe-uninitialized] SRC/iparam2stage.F:297:0: Warning: 'cprec' may be used uninitialized in this function [-Wmaybe-uninitialized] clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o libRlapack.dylib dlamch.o dlapack.o cmplx.o -install_name libRlapack.dylib -compatibility_version 4.1.0 -current_version 4.1.2 -headerpad_max_install_names -L"../../../lib" -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin18/8.2.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -L"../../../lib" -lR
ld: warning: dylib (/usr/local/gfortran/lib/libgfortran.dylib) was built for newer macOS version (10.14) than being linked (10.13) ld: warning: could not create compact unwind for _dpbtrf_: stack subq instruction is too different from dwarf stack size ld: warning: could not create compact unwind for _dhseqr_: stack subq instruction is too different from dwarf stack size ld: warning: dylib (/usr/local/gfortran/lib/libquadmath.dylib) was built for newer macOS version (10.14) than being linked (10.13) #ar -cr libRlapack.dylib dlamch.o dlapack.o cmplx.o clang -mmacosx-version-min=10.13 -I. -I../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/modules/lapack/Lapack.c -o Lapack.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L"../../../lib" -L/usr/local/lib -o lapack.so Lapack.o -lR -Wl,-framework -Wl,CoreFoundation -L"../../../lib" -lRlapack -L"../../../lib" -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin18/8.2.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm
ld: warning: dylib (/usr/local/gfortran/lib/libgfortran.dylib) was built for newer macOS version (10.14) than being linked (10.13) ld: warning: dylib (/usr/local/gfortran/lib/libquadmath.dylib) was built for newer macOS version (10.14) than being linked (10.13) /Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib/libRlapack.dylib is unchanged mkdir ../../library building system startup profile mkdir ../../../library/base mkdir ../../../library/base/R building package 'translations' mkdir ../../../library/translations building package 'base' mkdir ../../../library/base/demo building package 'tools' mkdir ../../../library/tools mkdir ../../../library/tools/R making text.d from /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/text.c making init.d from /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/init.c making Rmd5.d from /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/Rmd5.c making md5.d from /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/md5.c making signals.d from /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/signals.c making install.d from /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/install.c making getfmts.d from /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/getfmts.c making http.d from /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/http.c making gramLatex.d from /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/gramLatex.c making gramRd.d from /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/gramRd.c clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/text.c -o text.o making pdscan.d from /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/pdscan.c clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/init.c -o init.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/Rmd5.c -o Rmd5.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/md5.c -o md5.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/signals.c -o signals.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/install.c -o install.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/getfmts.c -o getfmts.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/http.c -o http.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/gramLatex.c -o gramLatex.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/gramRd.c -o gramRd.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/tools/src/pdscan.c -o pdscan.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L../../../../lib -L/usr/local/lib -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o pdscan.o -L../../../../lib -lR -Wl,-framework -Wl,CoreFoundation mkdir ../../../../library/tools/libs installing 'sysdata.rda' building package 'compiler' mkdir ../../../library/compiler mkdir ../../../library/compiler/R byte-compiling package 'compiler' byte-compiling package 'base' byte-compiling package 'tools' building package 'utils' mkdir ../../../library/utils mkdir ../../../library/utils/doc mkdir ../../../library/utils/R mkdir ../../../library/utils/Sweave mkdir ../../../library/utils/misc making init.d from /Volumes/Builds/R4/R-4.1-branch/src/library/utils/src/init.c making io.d from /Volumes/Builds/R4/R-4.1-branch/src/library/utils/src/io.c making size.d from /Volumes/Builds/R4/R-4.1-branch/src/library/utils/src/size.c making sock.d from /Volumes/Builds/R4/R-4.1-branch/src/library/utils/src/sock.c making stubs.d from /Volumes/Builds/R4/R-4.1-branch/src/library/utils/src/stubs.c making utils.d from /Volumes/Builds/R4/R-4.1-branch/src/library/utils/src/utils.c clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/utils/src/init.c -o init.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/utils/src/io.c -o io.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/utils/src/size.c -o size.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/utils/src/sock.c -o sock.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/utils/src/stubs.c -o stubs.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/utils/src/utils.c -o utils.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L../../../../lib -L/usr/local/lib -o utils.so init.o io.o size.o sock.o stubs.o utils.o -L../../../../lib -lR -Wl,-framework -Wl,CoreFoundation mkdir ../../../../library/utils/libs installing 'sysdata.rda' byte-compiling package 'utils' building package 'grDevices' mkdir ../../../library/grDevices mkdir ../../../library/grDevices/R mkdir ../../../library/grDevices/afm mkdir ../../../library/grDevices/enc mkdir ../../../library/grDevices/icc making axis_scales.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/axis_scales.c making chull.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/chull.c making devices.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/devices.c making init.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/init.c making stubs.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/stubs.c making colors.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/colors.c making clippath.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/clippath.c making patterns.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/patterns.c making mask.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/mask.c making devCairo.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/devCairo.c making devPicTeX.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/devPicTeX.c making devPS.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/devPS.c making devQuartz.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/devQuartz.c making qdBitmap.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdBitmap.c making qdPDF.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdPDF.c making qdCocoa.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/axis_scales.c -o axis_scales.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/chull.c -o chull.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/devices.c -o devices.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/init.c -o init.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/stubs.c -o stubs.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/colors.c -o colors.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/clippath.c -o clippath.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/patterns.c -o patterns.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/mask.c -o mask.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/devCairo.c -o devCairo.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/devPicTeX.c -o devPicTeX.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/devPS.c -o devPS.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/devQuartz.c -o devQuartz.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdBitmap.c -o qdBitmap.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdPDF.c -o qdPDF.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -fobjc-exceptions -c /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m -o qdCocoa.o
/Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdBitmap.c:61:39: warning: 'CFURLCreateStringByAddingPercentEscapes' is deprecated: first deprecated in macOS 10.11 - Use [NSString stringByAddingPercentEncodingWithAllowedCharacters:] instead, which always uses the recommended UTF-8 encoding, and which encodes for a specific URL component or subcomponent (since each URL component or subcomponent has different rules for what characters are valid). [-Wdeprecated-declarations] CFStringRef pathEscaped = CFURLCreateStringByAddingPercentEscapes(kCFAllocatorDefault, pathString, NULL, NULL, kCFStringEncodingUTF8); ^ /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/CoreFoundation.framework/Headers/CFURL.h:402:13: note: 'CFURLCreateStringByAddingPercentEscapes' has been explicitly marked deprecated here CFStringRef CFURLCreateStringByAddingPercentEscapes(CFAllocatorRef allocator, CFStringRef originalString, CFStringRef charactersToLeaveUnescaped, CFStringRef legalURLCharactersToBeEscaped, CFStringEncoding encoding) API_DEPRECATED("Use [NSString stringByAddingPercentEncodingWithAllowedCharacters:] instead, which always uses the recommended UTF-8 encoding, and which encodes for a specific URL component or subcomponent (since each URL component or subcomponent has different rules for what characters are valid).", macos(10.0,10.11), ios(2.0,9.0), watchos(2.0,2.0), tvos(9.0,9.0)); ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/devQuartz.c:660:23: warning: 'ATSFontFindFromName' is deprecated: first deprecated in macOS 10.8 - Use CTFontCreateWithName() [-Wdeprecated-declarations] atsFont = ATSFontFindFromName(cfFontName, kATSOptionFlagsDefault); ^ /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/ApplicationServices.framework/Frameworks/ATS.framework/Headers/ATSFont.h:811:1: note: 'ATSFontFindFromName' has been explicitly marked deprecated here ATSFontFindFromName( ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/devQuartz.c:662:27: warning: 'ATSFontFindFromPostScriptName' is deprecated: first deprecated in macOS 10.8 - Use CTFontCreateWithName() [-Wdeprecated-declarations] atsFont = ATSFontFindFromPostScriptName(cfFontName, kATSOptionFlagsDefault); ^ /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/ApplicationServices.framework/Frameworks/ATS.framework/Headers/ATSFont.h:828:1: note: 'ATSFontFindFromPostScriptName' has been explicitly marked deprecated here ATSFontFindFromPostScriptName( ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/devQuartz.c:689:27: warning: 'ATSFontFindFromName' is deprecated: first deprecated in macOS 10.8 - Use CTFontCreateWithName() [-Wdeprecated-declarations] atsFont = ATSFontFindFromName(cfFontName, kATSOptionFlagsDefault); ^ /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/ApplicationServices.framework/Frameworks/ATS.framework/Headers/ATSFont.h:811:1: note: 'ATSFontFindFromName' has been explicitly marked deprecated here ATSFontFindFromName( ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/devQuartz.c:690:41: warning: 'ATSFontFindFromPostScriptName' is deprecated: first deprecated in macOS 10.8 - Use CTFontCreateWithName() [-Wdeprecated-declarations] if (!atsFont) atsFont = ATSFontFindFromPostScriptName(cfFontName, kATSOptionFlagsDefault); ^ /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/ApplicationServices.framework/Frameworks/ATS.framework/Headers/ATSFont.h:828:1: note: 'ATSFontFindFromPostScriptName' has been explicitly marked deprecated here ATSFontFindFromPostScriptName( ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/devQuartz.c:696:35: warning: 'ATSFontFindFromName' is deprecated: first deprecated in macOS 10.8 - Use CTFontCreateWithName() [-Wdeprecated-declarations] atsFont = ATSFontFindFromName(cfFontName, kATSOptionFlagsDefault); ^ /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/ApplicationServices.framework/Frameworks/ATS.framework/Headers/ATSFont.h:811:1: note: 'ATSFontFindFromName' has been explicitly marked deprecated here ATSFontFindFromName( ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/devQuartz.c:702:39: warning: 'ATSFontFindFromName' is deprecated: first deprecated in macOS 10.8 - Use CTFontCreateWithName() [-Wdeprecated-declarations] atsFont = ATSFontFindFromName(cfFontName, kATSOptionFlagsDefault); ^ /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/ApplicationServices.framework/Frameworks/ATS.framework/Headers/ATSFont.h:811:1: note: 'ATSFontFindFromName' has been explicitly marked deprecated here ATSFontFindFromName( ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/devQuartz.c:710:35: warning: 'ATSFontFindFromName' is deprecated: first deprecated in macOS 10.8 - Use CTFontCreateWithName() [-Wdeprecated-declarations] atsFont = ATSFontFindFromName(cfFontName, kATSOptionFlagsDefault); ^ /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/ApplicationServices.framework/Frameworks/ATS.framework/Headers/ATSFont.h:811:1: note: 'ATSFontFindFromName' has been explicitly marked deprecated here ATSFontFindFromName( ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/devQuartz.c:729:12: warning: 'CGFontCreateWithPlatformFont' is deprecated: first deprecated in macOS 10.6 - No longer supported [-Wdeprecated-declarations] return CGFontCreateWithPlatformFont(&atsFont); ^ /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/CoreGraphics.framework/Headers/CGFont.h:64:32: note: 'CGFontCreateWithPlatformFont' has been explicitly marked deprecated here CG_EXTERN CGFontRef __nullable CGFontCreateWithPlatformFont( ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/devQuartz.c:1012:5: warning: 'CGContextShowGlyphsWithAdvances' is deprecated: first deprecated in macOS 10.9 - No longer supported [-Wdeprecated-declarations] CGContextShowGlyphsWithAdvances(ctx,glyphs, g_adv, len); ^ /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/CoreGraphics.framework/Headers/CGContext.h:1070:16: note: 'CGContextShowGlyphsWithAdvances' has been explicitly marked deprecated here CG_EXTERN void CGContextShowGlyphsWithAdvances(CGContextRef cg_nullable c, ^ 1 warning generated. 9 warnings generated. /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m:94:22: warning: 'NSTitledWindowMask' is deprecated: first deprecated in macOS 10.12 [-Wdeprecated-declarations] styleMask: NSTitledWindowMask|NSClosableWindowMask| ^~~~~~~~~~~~~~~~~~ NSWindowStyleMaskTitled /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSWindow.h:850:32: note: 'NSTitledWindowMask' has been explicitly marked deprecated here static const NSWindowStyleMask NSTitledWindowMask API_DEPRECATED_WITH_REPLACEMENT("NSWindowStyleMaskTitled", macos(10.0,10.12)) = NSWindowStyleMaskTitled; ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m:94:41: warning: 'NSClosableWindowMask' is deprecated: first deprecated in macOS 10.12 [-Wdeprecated-declarations] styleMask: NSTitledWindowMask|NSClosableWindowMask| ^~~~~~~~~~~~~~~~~~~~ NSWindowStyleMaskClosable /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSWindow.h:851:32: note: 'NSClosableWindowMask' has been explicitly marked deprecated here static const NSWindowStyleMask NSClosableWindowMask API_DEPRECATED_WITH_REPLACEMENT("NSWindowStyleMaskClosable", macos(10.0,10.12)) = NSWindowStyleMaskClosable; ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m:95:8: warning: 'NSMiniaturizableWindowMask' is deprecated: first deprecated in macOS 10.12 [-Wdeprecated-declarations] NSMiniaturizableWindowMask|NSResizableWindowMask//|NSTexturedBackgroundWindowMask ^~~~~~~~~~~~~~~~~~~~~~~~~~ NSWindowStyleMaskMiniaturizable /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSWindow.h:852:32: note: 'NSMiniaturizableWindowMask' has been explicitly marked deprecated here static const NSWindowStyleMask NSMiniaturizableWindowMask API_DEPRECATED_WITH_REPLACEMENT("NSWindowStyleMaskMiniaturizable", macos(10.0,10.12)) = NSWindowStyleMaskMiniaturizable; ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m:95:35: warning: 'NSResizableWindowMask' is deprecated: first deprecated in macOS 10.12 [-Wdeprecated-declarations] NSMiniaturizableWindowMask|NSResizableWindowMask//|NSTexturedBackgroundWindowMask ^~~~~~~~~~~~~~~~~~~~~ NSWindowStyleMaskResizable /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSWindow.h:853:32: note: 'NSResizableWindowMask' has been explicitly marked deprecated here static const NSWindowStyleMask NSResizableWindowMask API_DEPRECATED_WITH_REPLACEMENT("NSWindowStyleMaskResizable", macos(10.0,10.12)) = NSWindowStyleMaskResizable; ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m:102:23: warning: sending 'QuartzCocoaView *' to parameter of incompatible type 'id _Nullable' [window setDelegate: view]; ^~~~ /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSWindow.h:234:49: note: passing argument to parameter 'delegate' here @property (nullable, weak) id delegate; ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m:86:14: warning: unused variable 'canvasColor' [-Wunused-variable] NSColor* canvasColor = nil; ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m:269:6: warning: 'setRequiredFileType:' is deprecated: first deprecated in macOS 10.6 - Use -setAllowedFileTypes: instead [-Wdeprecated-declarations] [sp setRequiredFileType:@"pdf"]; ^ /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSSavePanel.h:204:1: note: 'setRequiredFileType:' has been explicitly marked deprecated here - (void)setRequiredFileType:(nullable NSString *)type API_DEPRECATED("Use -setAllowedFileTypes: instead", macos(10.0,10.6)); ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m:271:19: warning: 'runModalForDirectory:file:' is deprecated: first deprecated in macOS 10.6 - Use -runModal instead. The following parameters are replaced by properties: 'path' is replaced by 'directoryURL' and 'name' by 'nameFieldStringValue'. [-Wdeprecated-declarations] int answer = [sp runModalForDirectory:nil file:@"Rplot.pdf"]; ^ /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSSavePanel.h:206:1: note: 'runModalForDirectory:file:' has been explicitly marked deprecated here - (NSInteger)runModalForDirectory:(nullable NSString *)path file:(nullable NSString *)name API_DEPRECATED("Use -runModal instead. The following parameters are replaced by properties: 'path' is replaced by 'directoryURL' and 'name' by 'nameFieldStringValue'.", macos(10.0,10.6)); ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m:272:15: warning: 'NSOKButton' is deprecated: first deprecated in macOS 10.10 [-Wdeprecated-declarations] if(answer == NSOKButton) ^~~~~~~~~~ NSModalResponseOK /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSPanel.h:50:5: note: 'NSOKButton' has been explicitly marked deprecated here NSOKButton API_DEPRECATED_WITH_REPLACEMENT("NSModalResponseOK", macos(10.0,10.10)) = NSModalResponseOK, ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m:273:29: warning: 'filename' is deprecated: first deprecated in macOS 10.6 - Use -URL instead [-Wdeprecated-declarations] if (![self writeAsPDF:[sp filename]]) NSBeep(); ^ /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSSavePanel.h:200:1: note: 'filename' has been explicitly marked deprecated here - (NSString *)filename API_DEPRECATED("Use -URL instead", macos(10.0,10.6)); ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m:405:17: warning: 'NSControlKeyMask' is deprecated: first deprecated in macOS 10.12 [-Wdeprecated-declarations] if (mf&(NSControlKeyMask|NSRightMouseDownMask|NSOtherMouseDownMask)) ^~~~~~~~~~~~~~~~ NSEventModifierFlagControl /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSEvent.h:178:35: note: 'NSControlKeyMask' has been explicitly marked deprecated here static const NSEventModifierFlags NSControlKeyMask API_DEPRECATED_WITH_REPLACEMENT("NSEventModifierFlagControl", macos(10.0,10.12)) = NSEventModifierFlagControl; ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m:405:34: warning: 'NSRightMouseDownMask' is deprecated: first deprecated in macOS 10.12 [-Wdeprecated-declarations] if (mf&(NSControlKeyMask|NSRightMouseDownMask|NSOtherMouseDownMask)) ^~~~~~~~~~~~~~~~~~~~ NSEventMaskRightMouseDown /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSEvent.h:136:26: note: 'NSRightMouseDownMask' has been explicitly marked deprecated here static const NSEventMask NSRightMouseDownMask API_DEPRECATED_WITH_REPLACEMENT("NSEventMaskRightMouseDown", macos(10.0,10.12)) = NSEventMaskRightMouseDown; ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m:405:55: warning: 'NSOtherMouseDownMask' is deprecated: first deprecated in macOS 10.12 [-Wdeprecated-declarations] if (mf&(NSControlKeyMask|NSRightMouseDownMask|NSOtherMouseDownMask)) ^~~~~~~~~~~~~~~~~~~~ NSEventMaskOtherMouseDown /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSEvent.h:154:26: note: 'NSOtherMouseDownMask' has been explicitly marked deprecated here static const NSEventMask NSOtherMouseDownMask API_DEPRECATED_WITH_REPLACEMENT("NSEventMaskOtherMouseDown", macos(10.0,10.12)) = NSEventMaskOtherMouseDown; ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m:559:54: warning: 'NSAnyEventMask' is deprecated: first deprecated in macOS 10.12 [-Wdeprecated-declarations] while ((event = [NSApp nextEventMatchingMask:NSAnyEventMask ^~~~~~~~~~~~~~ NSEventMaskAny /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSEvent.h:157:26: note: 'NSAnyEventMask' has been explicitly marked deprecated here static const NSEventMask NSAnyEventMask API_DEPRECATED_WITH_REPLACEMENT("NSEventMaskAny", macos(10.0,10.12)) = NSUIntegerMax; ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m:625:13: warning: 'GetFrontProcess' is deprecated: first deprecated in macOS 10.9 [-Wdeprecated-declarations] if (GetFrontProcess(&frProc) == noErr) { ^ /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/ApplicationServices.framework/Frameworks/HIServices.framework/Headers/Processes.h:434:1: note: 'GetFrontProcess' has been explicitly marked deprecated here GetFrontProcess(ProcessSerialNumber * PSN) AVAILABLE_MAC_OS_X_VERSION_10_0_AND_LATER_BUT_DEPRECATED_IN_MAC_OS_X_VERSION_10_9; ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m:626:17: warning: 'GetCurrentProcess' is deprecated: first deprecated in macOS 10.9 [-Wdeprecated-declarations] if (GetCurrentProcess(&myProc) == noErr) { ^ /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/ApplicationServices.framework/Frameworks/HIServices.framework/Headers/Processes.h:415:1: note: 'GetCurrentProcess' has been explicitly marked deprecated here MacGetCurrentProcess(ProcessSerialNumber * PSN) AVAILABLE_MAC_OS_X_VERSION_10_0_AND_LATER_BUT_DEPRECATED_IN_MAC_OS_X_VERSION_10_9; ^ /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/ApplicationServices.framework/Frameworks/HIServices.framework/Headers/Processes.h:412:34: note: expanded from macro 'MacGetCurrentProcess' #define MacGetCurrentProcess GetCurrentProcess ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m:627:21: warning: 'SameProcess' is deprecated: first deprecated in macOS 10.9 [-Wdeprecated-declarations] if (SameProcess(&frProc, &myProc, &sameProc) == noErr && !sameProc) { ^ /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/ApplicationServices.framework/Frameworks/HIServices.framework/Headers/Processes.h:696:1: note: 'SameProcess' has been explicitly marked deprecated here SameProcess( ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m:630:17: warning: 'SetFrontProcess' is deprecated: first deprecated in macOS 10.9 [-Wdeprecated-declarations] SetFrontProcess(&myProc); ^ /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/ApplicationServices.framework/Frameworks/HIServices.framework/Headers/Processes.h:603:1: note: 'SetFrontProcess' has been explicitly marked deprecated here SetFrontProcess(const ProcessSerialNumber * PSN) AVAILABLE_MAC_OS_X_VERSION_10_0_AND_LATER_BUT_DEPRECATED_IN_MAC_OS_X_VERSION_10_9; ^ /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/qdCocoa.m:743:55: warning: 'NSAnyEventMask' is deprecated: first deprecated in macOS 10.12 [-Wdeprecated-declarations] NSEvent *event = [NSApp nextEventMatchingMask:NSAnyEventMask ^~~~~~~~~~~~~~ NSEventMaskAny /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX10.15.sdk/System/Library/Frameworks/AppKit.framework/Headers/NSEvent.h:157:26: note: 'NSAnyEventMask' has been explicitly marked deprecated here static const NSEventMask NSAnyEventMask API_DEPRECATED_WITH_REPLACEMENT("NSEventMaskAny", macos(10.0,10.12)) = NSUIntegerMax; ^ 19 warnings generated. clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L../../../../lib -L/usr/local/lib -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o clippath.o patterns.o mask.o devCairo.o devPicTeX.o devPS.o devQuartz.o qdBitmap.o qdPDF.o qdCocoa.o -framework AppKit -lz -L../../../../lib -lR -Wl,-framework -Wl,CoreFoundation mkdir ../../../../library/grDevices/libs making cairoBM.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/cairo/cairoBM.c clang -mmacosx-version-min=10.13 -I. -I../../../../../src/include -I/Volumes/Builds/R4/R-4.1-branch/src/include -I/usr/local/include/cairo -I/usr/local/include/pixman-1 -I/usr/local/include -I/usr/local/include/libxml2 -I/usr/local/include/freetype2 -I/usr/local/include/libpng16 -I/Volumes/Builds/R4/R-4.1-branch/src/modules/X11 -I/usr/local/include -DHAVE_CONFIG_H -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grDevices/src/cairo/cairoBM.c -o cairoBM.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L"../../../../../lib" -L/usr/local/lib -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -L/usr/local/lib -ltiff -L/usr/local/lib -ljpeg -L/usr/local/lib -lpng16 -lz -L/usr/local/lib -L/usr/X11/lib -L/usr/local/lib -lz -lcairo -lz -lXrender -lSM -lICE -lX11 -lXext -lpixman-1 -lfontconfig -lxml2 -lpthread -lz -llzma -liconv -lm -lfreetype -lbz2 -lpng16 -lz -L"../../../../../lib" -lR -Wl,-framework -Wl,CoreFoundation byte-compiling package 'grDevices' building package 'graphics' mkdir ../../../library/graphics mkdir ../../../library/graphics/R making init.d from /Volumes/Builds/R4/R-4.1-branch/src/library/graphics/src/init.c making base.d from /Volumes/Builds/R4/R-4.1-branch/src/library/graphics/src/base.c making graphics.d from /Volumes/Builds/R4/R-4.1-branch/src/library/graphics/src/graphics.c making par.d from /Volumes/Builds/R4/R-4.1-branch/src/library/graphics/src/par.c making plot.d from /Volumes/Builds/R4/R-4.1-branch/src/library/graphics/src/plot.c making plot3d.d from /Volumes/Builds/R4/R-4.1-branch/src/library/graphics/src/plot3d.c clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/graphics/src/init.c -o init.o making stem.d from /Volumes/Builds/R4/R-4.1-branch/src/library/graphics/src/stem.c clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/graphics/src/base.c -o base.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/graphics/src/graphics.c -o graphics.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/graphics/src/par.c -o par.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/graphics/src/plot.c -o plot.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/graphics/src/plot3d.c -o plot3d.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/Volumes/Builds/R4/R-4.1-branch/src/main -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/graphics/src/stem.c -o stem.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L../../../../lib -L/usr/local/lib -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o -L../../../../lib -lR -Wl,-framework -Wl,CoreFoundation mkdir ../../../../library/graphics/libs byte-compiling package 'graphics' building package 'stats' mkdir ../../../library/stats mkdir ../../../library/stats/R making init.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/init.c making kmeans.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/kmeans.c making ansari.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/ansari.c making bandwidths.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/bandwidths.c making chisqsim.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/chisqsim.c making d2x2xk.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/d2x2xk.c making fexact.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/fexact.c making kendall.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/kendall.c making ks.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/ks.c making line.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/line.c making smooth.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/smooth.c making prho.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/prho.c making swilk.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/swilk.c making ksmooth.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/ksmooth.c making loessc.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/loessc.c making monoSpl.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/monoSpl.c making isoreg.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/isoreg.c making Srunmed.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/Srunmed.c making dblcen.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/dblcen.c making distance.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/distance.c making hclust-utils.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/hclust-utils.c making nls.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/nls.c making rWishart.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/rWishart.c making HoltWinters.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/HoltWinters.c making PPsum.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/PPsum.c making arima.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/arima.c making burg.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/burg.c making filter.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/filter.c making mAR.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/mAR.c making pacf.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/pacf.c making starma.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/starma.c making port.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/port.c making family.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/family.c making sbart.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/sbart.c making approx.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/approx.c making loglin.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/loglin.c making lowess.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/lowess.c making massdist.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/massdist.c making splines.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/splines.c making lm.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/lm.c making complete_cases.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/complete_cases.c making cov.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/cov.c making deriv.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/deriv.c making fft.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/fft.c making fourier.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/fourier.c making model.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/model.c making optim.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/optim.c making optimize.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/optimize.c making integrate.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/integrate.c making random.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/random.c making distn.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/distn.c making zeroin.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/zeroin.c making rcont.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/rcont.c making influence.d from /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/influence.c clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/init.c -o init.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/kmeans.c -o kmeans.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/ansari.c -o ansari.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/bandwidths.c -o bandwidths.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/chisqsim.c -o chisqsim.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/d2x2xk.c -o d2x2xk.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/fexact.c -o fexact.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/kendall.c -o kendall.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/ks.c -o ks.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/line.c -o line.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/smooth.c -o smooth.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/prho.c -o prho.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/swilk.c -o swilk.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/ksmooth.c -o ksmooth.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/loessc.c -o loessc.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/monoSpl.c -o monoSpl.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/isoreg.c -o isoreg.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/Srunmed.c -o Srunmed.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/dblcen.c -o dblcen.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/distance.c -o distance.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/hclust-utils.c -o hclust-utils.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/nls.c -o nls.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/rWishart.c -o rWishart.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/HoltWinters.c -o HoltWinters.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/PPsum.c -o PPsum.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/arima.c -o arima.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/burg.c -o burg.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/filter.c -o filter.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/mAR.c -o mAR.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/pacf.c -o pacf.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/starma.c -o starma.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/port.c -o port.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/family.c -o family.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/sbart.c -o sbart.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/approx.c -o approx.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/loglin.c -o loglin.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/lowess.c -o lowess.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/massdist.c -o massdist.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/splines.c -o splines.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/lm.c -o lm.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/complete_cases.c -o complete_cases.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/cov.c -o cov.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/deriv.c -o deriv.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/fft.c -o fft.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/fourier.c -o fourier.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/model.c -o model.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/optim.c -o optim.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/optimize.c -o optimize.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/integrate.c -o integrate.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/random.c -o random.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/distn.c -o distn.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/zeroin.c -o zeroin.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/rcont.c -o rcont.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/influence.c -o influence.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/bsplvd.f -o bsplvd.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/bvalue.f -o bvalue.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/bvalus.f -o bvalus.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/loessf.f -o loessf.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/ppr.f -o ppr.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/qsbart.f -o qsbart.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/sgram.f -o sgram.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/sinerp.f -o sinerp.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/sslvrg.f -o sslvrg.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/stxwx.f -o stxwx.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/hclust.f -o hclust.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/kmns.f -o kmns.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/eureka.f -o eureka.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/stl.f -o stl.o gfortran -mmacosx-version-min=10.13 -fPIC -Wall -g -O2 -msse2 -mfpmath=sse -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/portsrc.f -o portsrc.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/lminfl.f -o lminfl.o
/Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/portsrc.f:6663:0: NCOMP = NCOMP + 1 Warning: 'ncomp' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/portsrc.f:6574:0: INTEGER DEG,HEAD,IC,IP,IPL,IPU,IR,JCOL,JP,JPL,JPU,L,MAXINC, Warning: 'jcol' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/portsrc.f:5521:0: IF (ALPHAK .LE. ZERO .OR. ALPHAK .LT. LK .OR. ALPHAK .GE. UK) Warning: 'alphak' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/portsrc.f:5658:0: IF (ALPHAK .GE. TWOPSI*PSIFAC) GO TO 310 Warning: 'psifac' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/portsrc.f:10412:0: V(PREDUC) = HALF * (DABS(ALPHAK)*DST*DST + GTSTA) Warning: 'gtsta' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/portsrc.f:10329:0: IF (-V(DST0) .GE. ALPHAK .OR. ALPHAK .LT. LK .OR. ALPHAK .GE. UK) Warning: 'alphak' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/portsrc.f:10324:0: LK = DMAX1(LK, PHI*W(PHIPIN)) Warning: 'phi' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/portsrc.f:10466:0: IF (KA .GE. KAMIN) GO TO 340 Warning: 'kamin' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/portsrc.f:12243:0: V(NREDUC) = NRED Warning: 'nred' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/portsrc.f:12246:0: V(DST0) = DNWTST Warning: 'dnwtst' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/portsrc.f:2515:0: V(NREDUC) = NRED Warning: 'nred' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/portsrc.f:2514:0: 60 V(DST0) = DS0 Warning: 'ds0' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/portsrc.f:8174:0: V(NREDUC) = NRED Warning: 'nred' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/portsrc.f:8173:0: 90 V(DST0) = DS0 Warning: 'ds0' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/portsrc.f:8652:0: 210 IV(FDH) = HES Warning: 'hes' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/portsrc.f:3587:0: IF (LIV .LT. MIV2) GO TO 300 Warning: 'miv2' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/portsrc.f:12079:0: 270 CALL DITSUM(D, V(G1), IV, LIV, LV, P, V, X) Warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized] /Volumes/Builds/R4/R-4.1-branch/src/library/stats/src/portsrc.f:458:0: 300 CALL DITSUM(D, V(G1), IV, LIV, LV, P, V, X) Warning: 'g1' may be used uninitialized in this function [-Wmaybe-uninitialized] clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L../../../../lib -L/usr/local/lib -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -L../../../../lib -lRlapack -L../../../../lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin18/8.2.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -L../../../../lib -lR -Wl,-framework -Wl,CoreFoundation
ld: warning: could not create compact unwind for _splineaa_: stack subq instruction is too different from dwarf stack size ld: warning: dylib (/usr/local/gfortran/lib/libquadmath.dylib) was built for newer macOS version (10.14) than being linked (10.13) ld: warning: dylib (/usr/local/gfortran/lib/libgfortran.dylib) was built for newer macOS version (10.14) than being linked (10.13) ld: warning: could not create compact unwind for _ehg136_: stack subq instruction is too different from dwarf stack size ld: warning: could not create compact unwind for _ehg139_: stack subq instruction is too different from dwarf stack size mkdir ../../../../library/stats/libs byte-compiling package 'stats' building package 'datasets' mkdir ../../../library/datasets mkdir ../../../library/datasets/data building package 'methods' mkdir ../../../library/methods mkdir ../../../library/methods/R making do_substitute_direct.d from /Volumes/Builds/R4/R-4.1-branch/src/library/methods/src/do_substitute_direct.c making init.d from /Volumes/Builds/R4/R-4.1-branch/src/library/methods/src/init.c making methods_list_dispatch.d from /Volumes/Builds/R4/R-4.1-branch/src/library/methods/src/methods_list_dispatch.c making slot.d from /Volumes/Builds/R4/R-4.1-branch/src/library/methods/src/slot.c making class_support.d from /Volumes/Builds/R4/R-4.1-branch/src/library/methods/src/class_support.c making tests.d from /Volumes/Builds/R4/R-4.1-branch/src/library/methods/src/tests.c clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/methods/src/do_substitute_direct.c -o do_substitute_direct.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/methods/src/init.c -o init.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/methods/src/methods_list_dispatch.c -o methods_list_dispatch.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/methods/src/slot.c -o slot.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/methods/src/class_support.c -o class_support.o making utils.d from /Volumes/Builds/R4/R-4.1-branch/src/library/methods/src/utils.c clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/methods/src/tests.c -o tests.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/methods/src/utils.c -o utils.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L../../../../lib -L/usr/local/lib -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o -L../../../../lib -lR -Wl,-framework -Wl,CoreFoundation mkdir ../../../../library/methods/libs byte-compiling package 'methods' initializing class and method definitions ... done building package 'grid' mkdir ../../../library/grid mkdir ../../../library/grid/doc mkdir ../../../library/grid/R making clippath.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/clippath.c making gpar.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/gpar.c making grid.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/grid.c making just.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/just.c making layout.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/layout.c making mask.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/mask.c making matrix.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/matrix.c making register.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/register.c making state.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/state.c making unit.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/unit.c making util.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/util.c making viewport.d from /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/viewport.c clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/clippath.c -o clippath.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/gpar.c -o gpar.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/grid.c -o grid.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/just.c -o just.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/layout.c -o layout.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/mask.c -o mask.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/matrix.c -o matrix.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/register.c -o register.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/state.c -o state.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/unit.c -o unit.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/util.c -o util.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/grid/src/viewport.c -o viewport.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L../../../../lib -L/usr/local/lib -o grid.so clippath.o gpar.o grid.o just.o layout.o mask.o matrix.o register.o state.o unit.o util.o viewport.o -L../../../../lib -lR -Wl,-framework -Wl,CoreFoundation mkdir ../../../../library/grid/libs byte-compiling package 'grid' building package 'splines' mkdir ../../../library/splines mkdir ../../../library/splines/R clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/splines/src/splines.c -o splines.o making splines.d from /Volumes/Builds/R4/R-4.1-branch/src/library/splines/src/splines.c clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L../../../../lib -L/usr/local/lib -o splines.so splines.o -L../../../../lib -lR -Wl,-framework -Wl,CoreFoundation mkdir ../../../../library/splines/libs byte-compiling package 'splines' building package 'stats4' mkdir ../../../library/stats4 mkdir ../../../library/stats4/R byte-compiling package 'stats4' building package 'tcltk' mkdir ../../../library/tcltk mkdir ../../../library/tcltk/R mkdir ../../../library/tcltk/exec clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -I/usr/local/include -I/opt/X11/include -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/tcltk/src/init.c -o init.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -I/usr/local/include -I/opt/X11/include -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/tcltk/src/tcltk.c -o tcltk.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -I/usr/local/include -I/opt/X11/include -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/tcltk/src/tcltk_unix.c -o tcltk_unix.o making init.d from /Volumes/Builds/R4/R-4.1-branch/src/library/tcltk/src/init.c making tcltk.d from /Volumes/Builds/R4/R-4.1-branch/src/library/tcltk/src/tcltk.c making tcltk_unix.d from /Volumes/Builds/R4/R-4.1-branch/src/library/tcltk/src/tcltk_unix.c clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L../../../../lib -L/usr/local/lib -o tcltk.so init.o tcltk.o tcltk_unix.o -L/usr/local/lib -ltcl8.6 -L/usr/local/lib -ltk8.6 -L/opt/X11/lib -lX11 -Wl,-weak-lXss -lXext -L../../../../lib -lR -Wl,-framework -Wl,CoreFoundation mkdir ../../../../library/tcltk/libs byte-compiling package 'tcltk' building package 'parallel' mkdir ../../../library/parallel mkdir ../../../library/parallel/doc mkdir ../../../library/parallel/R clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/parallel/src/init.c -o init.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/parallel/src/rngstream.c -o rngstream.o clang -mmacosx-version-min=10.13 -I"../../../../include" -DNDEBUG -I../../../include -I/Volumes/Builds/R4/R-4.1-branch/src/include -DHAVE_CONFIG_H -I/usr/local/include -fPIC -Wall -g -O2 -c /Volumes/Builds/R4/R-4.1-branch/src/library/parallel/src/fork.c -o fork.o making init.d from /Volumes/Builds/R4/R-4.1-branch/src/library/parallel/src/init.c making rngstream.d from /Volumes/Builds/R4/R-4.1-branch/src/library/parallel/src/rngstream.c making fork.d from /Volumes/Builds/R4/R-4.1-branch/src/library/parallel/src/fork.c clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L../../../../lib -L/usr/local/lib -o parallel.so init.o rngstream.o fork.o -L../../../../lib -lR -Wl,-framework -Wl,CoreFoundation mkdir ../../../../library/parallel/libs byte-compiling package 'parallel' installing parsed NAMESPACE files make[1]: Nothing to be done for `R'. you should 'make docs' now ... configuring Java ... building/updating vignettes for package 'grid' ... Java interpreter : /usr/bin/java
processing 'displaylist.Rnw' Java version : 1.8.0_241 Java home path : /Library/Java/JavaVirtualMachines/jdk1.8.0_241.jdk/Contents/Home/jre creating doc/NEWS Java compiler : /usr/bin/javac Java headers gen.: /usr/bin/javah Java archive tool: /usr/bin/jar trying to compile and link a JNI program detected JNI cpp flags : -I$(JAVA_HOME)/../include -I$(JAVA_HOME)/../include/darwin detected JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm creating doc/NEWS.pdf clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/Library/Java/JavaVirtualMachines/jdk1.8.0_241.jdk/Contents/Home/jre/../include -I/Library/Java/JavaVirtualMachines/jdk1.8.0_241.jdk/Contents/Home/jre/../include/darwin -I/usr/local/include -fPIC -Wall -g -O2 -c conftest.c -o conftest.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -L/usr/local/lib -o conftest.so conftest.o -L/Library/Java/JavaVirtualMachines/jdk1.8.0_241.jdk/Contents/Home/jre/lib/server -ljvm -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -lR -Wl,-framework -Wl,CoreFoundation JAVA_HOME : /Library/Java/JavaVirtualMachines/jdk1.8.0_241.jdk/Contents/Home/jre Java library path: $(JAVA_HOME)/lib/server JNI cpp flags : -I$(JAVA_HOME)/../include -I$(JAVA_HOME)/../include/darwin JNI linker flags : -L$(JAVA_HOME)/lib/server -ljvm Updating Java configuration in /Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch Done.
processing 'frame.Rnw' creating doc/manual/R-FAQ.html creating doc/manual/version.texi mkdir ../../doc/manual/images creating doc/manual/R-admin.html creating doc/manual/R-data.html creating doc/manual/R-exts.html creating doc/manual/R-intro.html
processing 'grid.Rnw' creating doc/manual/R-ints.html creating doc/manual/R-lang.html installing parsed Rd methods graphics
processing 'grobs.Rnw' utils datasets
Warning: /Volumes/Builds/Simon/R4/R-4.1-branch/src/library/tools/man/xgettext.Rd:51: unknown macro '\n' grDevices tools tcltk grid splines compiler stats4 parallel stats base building/updating package metadata ...
processing 'interactive.Rnw' processing 'locndimn.Rnw' processing 'moveline.Rnw' writing package indices begin installing recommended package MASS begin installing recommended package lattice begin installing recommended package codetools begin installing recommended package foreign begin installing recommended package KernSmooth
processing 'nonfinite.Rnw' * installing *source* package 'codetools' ... ** package 'codetools' successfully unpacked and MD5 sums checked ** using non-staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (codetools) begin installing recommended package rpart
processing 'plotexample.Rnw' * installing *source* package 'KernSmooth' ... ** package 'KernSmooth' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c blkest.f -o blkest.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c cp.f -o cp.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c dgedi.f -o dgedi.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c dgefa.f -o dgefa.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c dgesl.f -o dgesl.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c linbin.f -o linbin.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c linbin2D.f -o linbin2D.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c locpoly.f -o locpoly.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c rlbin.f -o rlbin.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c sdiag.f -o sdiag.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c sstdiag.f -o sstdiag.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -L/usr/local/lib -o KernSmooth.so blkest.o cp.o dgedi.o dgefa.o dgesl.o init.o linbin.o linbin2D.o locpoly.o rlbin.o sdiag.o sstdiag.o -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin18/8.2.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin18/8.2.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -lR -Wl,-framework -Wl,CoreFoundation ld: warning: ld: warning: dylib (/usr/local/gfortran/lib/libgfortran.dylib) was built for newer macOS version (10.14) than being linked (10.13)dylib (/usr/local/gfortran/lib/libquadmath.dylib) was built for newer macOS version (10.14) than being linked (10.13) installing to /Volumes/Builds/Simon/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/library/KernSmooth/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (KernSmooth) begin installing recommended package nnet * installing *source* package 'foreign' ... ** package 'foreign' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c R_systat.c -o R_systat.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c Rdbfread.c -o Rdbfread.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c Rdbfwrite.c -o Rdbfwrite.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c SASxport.c -o SASxport.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c avl.c -o avl.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c dbfopen.c -o dbfopen.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c file-handle.c -o file-handle.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c format.c -o format.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c minitab.c -o minitab.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c pfm-read.c -o pfm-read.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c sfm-read.c -o sfm-read.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c spss.c -o spss.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c stataread.c -o stataread.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -L/usr/local/lib -o foreign.so R_systat.o Rdbfread.o Rdbfwrite.o SASxport.o avl.o dbfopen.o file-handle.o format.o init.o minitab.o pfm-read.o sfm-read.o spss.o stataread.o -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -lR -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/Simon/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/library/foreign/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (foreign) begin installing recommended package spatial * installing *source* package 'nnet' ... ** package 'nnet' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c nnet.c -o nnet.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -L/usr/local/lib -o nnet.so nnet.o -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -lR -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/Simon/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/library/nnet/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (nnet)
processing 'rotated.Rnw' processing 'saveload.Rnw' * installing *source* package 'spatial' ... ** package 'spatial' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c krc.c -o krc.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c pps.c -o pps.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -L/usr/local/lib -o spatial.so init.o krc.o pps.o -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -lR -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/Simon/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/library/spatial/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (spatial) * installing *source* package 'rpart' ... ** package 'rpart' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c anova.c -o anova.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c anovapred.c -o anovapred.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c branch.c -o branch.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c bsplit.c -o bsplit.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c choose_surg.c -o choose_surg.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c fix_cp.c -o fix_cp.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c free_tree.c -o free_tree.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c gini.c -o gini.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c graycode.c -o graycode.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c insert_split.c -o insert_split.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c make_cp_list.c -o make_cp_list.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c make_cp_table.c -o make_cp_table.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c mysort.c -o mysort.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c nodesplit.c -o nodesplit.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c partition.c -o partition.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c poisson.c -o poisson.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c pred_rpart.c -o pred_rpart.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c print_tree.c -o print_tree.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c rpart.c -o rpart.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c rpart_callback.c -o rpart_callback.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c rpartexp.c -o rpartexp.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c rpartexp2.c -o rpartexp2.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c rpcountup.c -o rpcountup.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c rpmatrix.c -o rpmatrix.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c rundown.c -o rundown.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c rundown2.c -o rundown2.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c surrogate.c -o surrogate.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c usersplit.c -o usersplit.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c xpred.c -o xpred.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c xval.c -o xval.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -L/usr/local/lib -o rpart.so anova.o anovapred.o branch.o bsplit.o choose_surg.o fix_cp.o free_tree.o gini.o graycode.o init.o insert_split.o make_cp_list.o make_cp_table.o mysort.o nodesplit.o partition.o poisson.o pred_rpart.o print_tree.o rpart.o rpart_callback.o rpartexp.o rpartexp2.o rpcountup.o rpmatrix.o rundown.o rundown2.o surrogate.o usersplit.o xpred.o xval.o -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -lR -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/Simon/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/library/rpart/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (rpart) * installing *source* package 'MASS' ... ** package 'MASS' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c MASS.c -o MASS.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c lqs.c -o lqs.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -L/usr/local/lib -o MASS.so MASS.o lqs.o -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -lR -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/Simon/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/library/MASS/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (MASS) begin installing recommended package class begin installing recommended package cluster
processing 'sharing.Rnw' * installing *source* package 'lattice' ... ** package 'lattice' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c threeDplot.c -o threeDplot.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -L/usr/local/lib -o lattice.so init.o threeDplot.o -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -lR -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/Simon/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/library/lattice/libs ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (lattice) begin installing recommended package nlme begin installing recommended package Matrix * installing *source* package 'class' ... ** package 'class' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c class.c -o class.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -L/usr/local/lib -o class.so class.o -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -lR -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/Simon/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/library/class/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (class)
processing 'viewports.Rnw' * installing *source* package 'cluster' ... ** package 'cluster' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c clara.c -o clara.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c daisy.f -o daisy.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c dysta.f -o dysta.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c fanny.c -o fanny.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c mona.c -o mona.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c pam.c -o pam.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c sildist.c -o sildist.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c spannel.c -o spannel.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c twins.c -o twins.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -L/usr/local/lib -o cluster.so clara.o daisy.o dysta.o fanny.o init.o mona.o pam.o sildist.o spannel.o twins.o -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin18/8.2.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -lR -Wl,-framework -Wl,CoreFoundation ld: warning: dylib (/usr/local/gfortran/lib/libgfortran.dylib) was built for newer macOS version (10.14) than being linked (10.13) ld: warning: dylib (/usr/local/gfortran/lib/libquadmath.dylib) was built for newer macOS version (10.14) than being linked (10.13) installing to /Volumes/Builds/Simon/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/library/cluster/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (cluster) building/updating vignettes for package 'parallel' ...
processing 'parallel.Rnw' building/updating vignettes for package 'utils' ...
processing 'Sweave.Rnw' building/updating vignettes for package 'stats' ...
processing 'reshape.Rnw' * installing *source* package 'nlme' ... ** package 'nlme' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c chol.f -o chol.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c corStruct.c -o corStruct.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c gnls.c -o gnls.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c matrix.c -o matrix.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c nlOptimizer.c -o nlOptimizer.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c nlme.c -o nlme.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c nlmefit.c -o nlmefit.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c pdMat.c -o pdMat.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c pythag.c -o pythag.o gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c rs.f -o rs.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -L/usr/local/lib -o nlme.so chol.o corStruct.o gnls.o init.o matrix.o nlOptimizer.o nlme.o nlmefit.o pdMat.o pythag.o rs.o -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin18/8.2.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -lR -Wl,-framework -Wl,CoreFoundation ld: warning: dylib (/usr/local/gfortran/lib/libgfortran.dylib) was built for newer macOS version (10.14) than being linked (10.13) ld: warning: dylib (/usr/local/gfortran/lib/libquadmath.dylib) was built for newer macOS version (10.14) than being linked (10.13) installing to /Volumes/Builds/Simon/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/library/nlme/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (nlme) * installing *source* package 'Matrix' ... ** package 'Matrix' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c CHMfactor.c -o CHMfactor.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c Csparse.c -o Csparse.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c TMatrix_as.c -o TMatrix_as.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c Tsparse.c -o Tsparse.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c Mutils.c -o Mutils.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c chm_common.c -o chm_common.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c cs.c -o cs.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c cs_utils.c -o cs_utils.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c dense.c -o dense.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c dgCMatrix.c -o dgCMatrix.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c dgTMatrix.c -o dgTMatrix.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c dgeMatrix.c -o dgeMatrix.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c dpoMatrix.c -o dpoMatrix.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c dppMatrix.c -o dppMatrix.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c dsCMatrix.c -o dsCMatrix.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c dsyMatrix.c -o dsyMatrix.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c dspMatrix.c -o dspMatrix.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c dtCMatrix.c -o dtCMatrix.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c dtTMatrix.c -o dtTMatrix.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c dtrMatrix.c -o dtrMatrix.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c dtpMatrix.c -o dtpMatrix.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c factorizations.c -o factorizations.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c ldense.c -o ldense.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c lgCMatrix.c -o lgCMatrix.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c sparseQR.c -o sparseQR.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I./SuiteSparse_config -DUSE_FC_LEN_T -I/usr/local/include -fPIC -Wall -g -O2 -c abIndex.c -o abIndex.o ( cd Lib ; /Applications/Xcode.app/Contents/Developer/usr/bin/make clean ) ( cd Source ; /Applications/Xcode.app/Contents/Developer/usr/bin/make clean ) ( cd Source ; /Applications/Xcode.app/Contents/Developer/usr/bin/make clean ) ( cd Lib ; /Applications/Xcode.app/Contents/Developer/usr/bin/make -f "/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/etc/Makeconf" -f Makefile ) clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Core/cholmod_aat.c -o cholmod_aat.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Core/cholmod_add.c -o cholmod_add.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Core/cholmod_band.c -o cholmod_band.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Core/cholmod_change_factor.c -o cholmod_change_factor.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Core/cholmod_common.c -o cholmod_common.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Core/cholmod_complex.c -o cholmod_complex.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Core/cholmod_copy.c -o cholmod_copy.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Core/cholmod_dense.c -o cholmod_dense.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Core/cholmod_error.c -o cholmod_error.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Core/cholmod_factor.c -o cholmod_factor.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Core/cholmod_memory.c -o cholmod_memory.o ../Core/cholmod_memory.c:121:12: warning: unused variable 's' [-Wunused-variable] size_t s ; ^ ../Core/cholmod_memory.c:311:12: warning: unused variable 's' [-Wunused-variable] size_t s ; ^ 2 warnings generated. clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Core/cholmod_sparse.c -o cholmod_sparse.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Core/cholmod_transpose.c -o cholmod_transpose.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Core/cholmod_triplet.c -o cholmod_triplet.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Core/cholmod_version.c -o cholmod_version.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Check/cholmod_check.c -o cholmod_check.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Check/cholmod_read.c -o cholmod_read.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Check/cholmod_write.c -o cholmod_write.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Cholesky/cholmod_amd.c -o cholmod_amd.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Cholesky/cholmod_analyze.c -o cholmod_analyze.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Cholesky/cholmod_colamd.c -o cholmod_colamd.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Cholesky/cholmod_etree.c -o cholmod_etree.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Cholesky/cholmod_factorize.c -o cholmod_factorize.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Cholesky/cholmod_postorder.c -o cholmod_postorder.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Cholesky/cholmod_rcond.c -o cholmod_rcond.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Cholesky/cholmod_resymbol.c -o cholmod_resymbol.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_rowcolcounts.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Cholesky/cholmod_rowfac.c -o cholmod_rowfac.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Cholesky/cholmod_solve.c -o cholmod_solve.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Cholesky/cholmod_spsolve.c -o cholmod_spsolve.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../MatrixOps/cholmod_drop.c -o cholmod_drop.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../MatrixOps/cholmod_horzcat.c -o cholmod_horzcat.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../MatrixOps/cholmod_norm.c -o cholmod_norm.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../MatrixOps/cholmod_scale.c -o cholmod_scale.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../MatrixOps/cholmod_sdmult.c -o cholmod_sdmult.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../MatrixOps/cholmod_ssmult.c -o cholmod_ssmult.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../MatrixOps/cholmod_submatrix.c -o cholmod_submatrix.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../MatrixOps/cholmod_vertcat.c -o cholmod_vertcat.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../MatrixOps/cholmod_symmetry.c -o cholmod_symmetry.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Modify/cholmod_rowadd.c -o cholmod_rowadd.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Modify/cholmod_rowdel.c -o cholmod_rowdel.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Modify/cholmod_updown.c -o cholmod_updown.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Supernodal/cholmod_super_numeric.c -o cholmod_super_numeric.o In file included from ../Supernodal/cholmod_super_numeric.c:82: ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] tail, nscol_new = 0; ^ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, ^ In file included from ../Supernodal/cholmod_super_numeric.c:84: ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] tail, nscol_new = 0; ^ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, ^ In file included from ../Supernodal/cholmod_super_numeric.c:86: ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, ^ ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] tail, nscol_new = 0; ^ clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Supernodal/cholmod_super_solve.c -o cholmod_super_solve.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_super_symbolic.o ../Supernodal/cholmod_super_symbolic.c:183:12: warning: unused variable 'max_bytes' [-Wunused-variable] size_t max_bytes; ^ ../Supernodal/cholmod_super_symbolic.c:182:17: warning: unused variable 'env_max_bytes' [-Wunused-variable] const char* env_max_bytes; ^ ../Supernodal/cholmod_super_symbolic.c:184:17: warning: unused variable 'env_max_fraction' [-Wunused-variable] const char* env_max_fraction; ^ ../Supernodal/cholmod_super_symbolic.c:181:17: warning: unused variable 'env_use_gpu' [-Wunused-variable] const char* env_use_gpu; ^ ../Supernodal/cholmod_super_symbolic.c:185:12: warning: unused variable 'max_fraction' [-Wunused-variable] double max_fraction; ^ 6 warnings generated. clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Core/cholmod_aat.c -o cholmod_l_aat.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Core/cholmod_add.c -o cholmod_l_add.o 5 warnings generated. clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Core/cholmod_band.c -o cholmod_l_band.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Core/cholmod_change_factor.c -o cholmod_l_change_factor.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Core/cholmod_common.c -o cholmod_l_common.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Core/cholmod_complex.c -o cholmod_l_complex.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Core/cholmod_copy.c -o cholmod_l_copy.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Core/cholmod_dense.c -o cholmod_l_dense.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Core/cholmod_error.c -o cholmod_l_error.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Core/cholmod_factor.c -o cholmod_l_factor.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Core/cholmod_memory.c -o cholmod_l_memory.o ../Core/cholmod_memory.c:121:12: warning: unused variable 's' [-Wunused-variable] size_t s ; ^ ../Core/cholmod_memory.c:311:12: warning: unused variable 's' [-Wunused-variable] size_t s ; ^ 2 warnings generated. clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Core/cholmod_sparse.c -o cholmod_l_sparse.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Core/cholmod_transpose.c -o cholmod_l_transpose.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Core/cholmod_triplet.c -o cholmod_l_triplet.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Core/cholmod_version.c -o cholmod_l_version.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Check/cholmod_check.c -o cholmod_l_check.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Check/cholmod_read.c -o cholmod_l_read.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Check/cholmod_write.c -o cholmod_l_write.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Cholesky/cholmod_amd.c -o cholmod_l_amd.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Cholesky/cholmod_analyze.c -o cholmod_l_analyze.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Cholesky/cholmod_colamd.c -o cholmod_l_colamd.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Cholesky/cholmod_etree.c -o cholmod_l_etree.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Cholesky/cholmod_factorize.c -o cholmod_l_factorize.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Cholesky/cholmod_postorder.c -o cholmod_l_postorder.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Cholesky/cholmod_rcond.c -o cholmod_l_rcond.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Cholesky/cholmod_resymbol.c -o cholmod_l_resymbol.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_l_rowcolcounts.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Cholesky/cholmod_rowfac.c -o cholmod_l_rowfac.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Cholesky/cholmod_solve.c -o cholmod_l_solve.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Cholesky/cholmod_spsolve.c -o cholmod_l_spsolve.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../MatrixOps/cholmod_drop.c -o cholmod_l_drop.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../MatrixOps/cholmod_horzcat.c -o cholmod_l_horzcat.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../MatrixOps/cholmod_norm.c -o cholmod_l_norm.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../MatrixOps/cholmod_scale.c -o cholmod_l_scale.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../MatrixOps/cholmod_sdmult.c -o cholmod_l_sdmult.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../MatrixOps/cholmod_ssmult.c -o cholmod_l_ssmult.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../MatrixOps/cholmod_submatrix.c -o cholmod_l_submatrix.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../MatrixOps/cholmod_vertcat.c -o cholmod_l_vertcat.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../MatrixOps/cholmod_symmetry.c -o cholmod_l_symmetry.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Modify/cholmod_rowadd.c -o cholmod_l_rowadd.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Modify/cholmod_rowdel.c -o cholmod_l_rowdel.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Modify/cholmod_updown.c -o cholmod_l_updown.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Supernodal/cholmod_super_numeric.c -o cholmod_l_super_numeric.o In file included from ../Supernodal/cholmod_super_numeric.c:82: ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] tail, nscol_new = 0; ^ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, ^ In file included from ../Supernodal/cholmod_super_numeric.c:84: ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] tail, nscol_new = 0; ^ ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, ^ In file included from ../Supernodal/cholmod_super_numeric.c:86: ../Supernodal/t_cholmod_super_numeric.c:113:9: warning: unused variable 'pj' [-Wunused-variable] pj, d, kd1, kd2, info, ndcol, ndrow, pdi, pdx, pdend, pdi1, pdi2, pdx1, ^ ../Supernodal/t_cholmod_super_numeric.c:116:9: warning: unused variable 'tail' [-Wunused-variable] tail, nscol_new = 0; ^ clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Supernodal/cholmod_super_solve.c -o cholmod_l_super_solve.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -I/usr/local/include -fPIC -Wall -g -O2 -DDLONG -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_l_super_symbolic.o 6 warnings generated. ../Supernodal/cholmod_super_symbolic.c:182:17: warning: unused variable 'env_max_bytes' [-Wunused-variable] const char* env_max_bytes; ^ ../Supernodal/cholmod_super_symbolic.c:181:17: warning: unused variable 'env_use_gpu' [-Wunused-variable] const char* env_use_gpu; ^ ../Supernodal/cholmod_super_symbolic.c:183:12: warning: unused variable 'max_bytes' [-Wunused-variable] size_t max_bytes; ^ ../Supernodal/cholmod_super_symbolic.c:185:12: warning: unused variable 'max_fraction' [-Wunused-variable] double max_fraction; ^ ../Supernodal/cholmod_super_symbolic.c:184:17: warning: unused variable 'env_max_fraction' [-Wunused-variable] const char* env_max_fraction; ^ 5 warnings generated. ar -rucs ../../CHOLMOD.a cholmod_aat.o cholmod_add.o cholmod_band.o cholmod_change_factor.o cholmod_common.o cholmod_complex.o cholmod_copy.o cholmod_dense.o cholmod_error.o cholmod_factor.o cholmod_memory.o cholmod_sparse.o cholmod_transpose.o cholmod_triplet.o cholmod_version.o cholmod_check.o cholmod_read.o cholmod_write.o cholmod_amd.o cholmod_analyze.o cholmod_colamd.o cholmod_etree.o cholmod_factorize.o cholmod_postorder.o cholmod_rcond.o cholmod_resymbol.o cholmod_rowcolcounts.o cholmod_rowfac.o cholmod_solve.o cholmod_spsolve.o cholmod_drop.o cholmod_horzcat.o cholmod_norm.o cholmod_scale.o cholmod_sdmult.o cholmod_ssmult.o cholmod_submatrix.o cholmod_vertcat.o cholmod_symmetry.o cholmod_rowadd.o cholmod_rowdel.o cholmod_updown.o cholmod_super_numeric.o cholmod_super_solve.o cholmod_super_symbolic.o cholmod_l_aat.o cholmod_l_add.o cholmod_l_band.o cholmod_l_change_factor.o cholmod_l_common.o cholmod_l_complex.o cholmod_l_copy.o cholmod_l_dense.o cholmod_l_error.o cholmod_l_factor.o cholmod_l_memory.o cholmod_l_sparse.o cholmod_l_transpose.o cholmod_l_triplet.o cholmod_l_version.o cholmod_l_check.o cholmod_l_read.o cholmod_l_write.o cholmod_l_amd.o cholmod_l_analyze.o cholmod_l_colamd.o cholmod_l_etree.o cholmod_l_factorize.o cholmod_l_postorder.o cholmod_l_rcond.o cholmod_l_resymbol.o cholmod_l_rowcolcounts.o cholmod_l_rowfac.o cholmod_l_solve.o cholmod_l_spsolve.o cholmod_l_drop.o cholmod_l_horzcat.o cholmod_l_norm.o cholmod_l_scale.o cholmod_l_sdmult.o cholmod_l_ssmult.o cholmod_l_submatrix.o cholmod_l_vertcat.o cholmod_l_symmetry.o cholmod_l_rowadd.o cholmod_l_rowdel.o cholmod_l_updown.o cholmod_l_super_numeric.o cholmod_l_super_solve.o cholmod_l_super_symbolic.o ( cd Source ; /Applications/Xcode.app/Contents/Developer/usr/bin/make -f "/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/etc/Makeconf" -f Makefile lib ) clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -c colamd.c -o colamd.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDLONG -c colamd.c -o colamd_l.o ar -rucs ../../COLAMD.a colamd.o colamd_l.o ( cd Source ; /Applications/Xcode.app/Contents/Developer/usr/bin/make -f "/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/etc/Makeconf" -f Makefile lib ) clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDINT -c amd_aat.c -o amd_i_aat.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDLONG -c amd_aat.c -o amd_l_aat.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDINT -c amd_1.c -o amd_i_1.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDLONG -c amd_1.c -o amd_l_1.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDINT -c amd_2.c -o amd_i_2.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDLONG -c amd_2.c -o amd_l_2.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDINT -c amd_postorder.c -o amd_i_postorder.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDLONG -c amd_postorder.c -o amd_l_postorder.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDINT -c amd_post_tree.c -o amd_i_post_tree.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDLONG -c amd_post_tree.c -o amd_l_post_tree.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDINT -c amd_defaults.c -o amd_i_defaults.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDLONG -c amd_defaults.c -o amd_l_defaults.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDINT -c amd_order.c -o amd_i_order.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDLONG -c amd_order.c -o amd_l_order.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDINT -c amd_control.c -o amd_i_control.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDLONG -c amd_control.c -o amd_l_control.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDINT -c amd_info.c -o amd_i_info.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDLONG -c amd_info.c -o amd_l_info.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDINT -c amd_valid.c -o amd_i_valid.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDLONG -c amd_valid.c -o amd_l_valid.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDINT -c amd_preprocess.c -o amd_i_preprocess.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDLONG -c amd_preprocess.c -o amd_l_preprocess.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDINT -c amd_dump.c -o amd_i_dump.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I../Include -I../../SuiteSparse_config -I/usr/local/include -fPIC -Wall -g -O2 -I../Include -DDLONG -c amd_dump.c -o amd_l_dump.o ar -rucs ../../AMD.a amd_i_aat.o amd_l_aat.o amd_i_1.o amd_l_1.o amd_i_2.o amd_l_2.o amd_i_postorder.o amd_l_postorder.o amd_i_post_tree.o amd_l_post_tree.o amd_i_defaults.o amd_l_defaults.o amd_i_order.o amd_l_order.o amd_i_control.o amd_l_control.o amd_i_info.o amd_l_info.o amd_i_valid.o amd_l_valid.o amd_i_preprocess.o amd_l_preprocess.o amd_i_dump.o amd_l_dump.o /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: ../../AMD.a(amd_i_dump.o) has no symbols /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: ../../AMD.a(amd_l_dump.o) has no symbols clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -DNTIMER -I/usr/local/include -fPIC -Wall -g -O2 -c SuiteSparse_config.c -o SuiteSparse_config.o ar -rucs ../SuiteSparse_config.a SuiteSparse_config.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -L/usr/local/lib -o Matrix.so CHMfactor.o Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o chm_common.o cs.o cs_utils.o dense.o dgCMatrix.o dgTMatrix.o dgeMatrix.o dpoMatrix.o dppMatrix.o dsCMatrix.o dsyMatrix.o dspMatrix.o dtCMatrix.o dtTMatrix.o dtrMatrix.o dtpMatrix.o factorizations.o ldense.o lgCMatrix.o sparseQR.o abIndex.o CHOLMOD.a COLAMD.a AMD.a SuiteSparse_config.a -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -lRlapack -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin18/8.2.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -lR -Wl,-framework -Wl,CoreFoundation ld: warning: dylib (/usr/local/gfortran/lib/libgfortran.dylib) was built for newer macOS version (10.14) than being linked (10.13) ld: warning: dylib (/usr/local/gfortran/lib/libquadmath.dylib) was built for newer macOS version (10.14) than being linked (10.13) installing to /Volumes/Builds/Simon/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/library/Matrix/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for 'chol2inv' from 'base' in package 'Matrix' (from the saved implicit definition) Creating a generic function for 'chol2inv' from package 'base' in package 'Matrix' Creating a generic function for 'diag' from package 'base' in package 'Matrix' Creating a generic function for 'drop' from package 'base' in package 'Matrix' Creating a generic function for 'cov2cor' from package 'stats' in package 'Matrix' Creating a generic function for 'unname' from package 'base' in package 'Matrix' Creating a generic function for 'norm' from package 'base' in package 'Matrix' Creating a generic function for 'rcond' from 'base' in package 'Matrix' (from the saved implicit definition) Creating a generic function for 'rcond' from package 'base' in package 'Matrix' in method for 'coerce' with signature '"matrix.csr","dgRMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"dgRMatrix","matrix.csr"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.csc","dgCMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"dgCMatrix","matrix.csc"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.coo","dgTMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"dgTMatrix","matrix.coo"': no definition for class "matrix.coo" in method for 'coerce' with signature '"dsparseMatrix","matrix.csr"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.csr","dgCMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","dgCMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csr","RsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.csc","CsparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.coo","TsparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csr","CsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","CsparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csc","TsparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","TsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"CsparseMatrix","matrix.csr"': no definition for class "matrix.csr" in method for 'coerce' with signature '"CsparseMatrix","matrix.coo"': no definition for class "matrix.coo" in method for 'coerce' with signature '"CsparseMatrix","matrix.csc"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","Matrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","Matrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csc","Matrix"': no definition for class "matrix.csc" Creating a generic function for 'colSums' from package 'base' in package 'Matrix' Creating a generic function for 'colMeans' from package 'base' in package 'Matrix' Creating a generic function for 'rowSums' from package 'base' in package 'Matrix' Creating a generic function for 'rowMeans' from package 'base' in package 'Matrix' in method for 'colSums' with signature 'x="igCMatrix"': no definition for class "igCMatrix" in method for 'rowSums' with signature 'x="igCMatrix"': no definition for class "igCMatrix" in method for 'colMeans' with signature 'x="igCMatrix"': no definition for class "igCMatrix" in method for 'rowMeans' with signature 'x="igCMatrix"': no definition for class "igCMatrix" Creating a generic function for 'zapsmall' from package 'base' in package 'Matrix' Creating a generic function for 'diag<-' from package 'base' in package 'Matrix' Creating a generic function for 'crossprod' from package 'base' in package 'Matrix' Creating a generic function for 'tcrossprod' from package 'base' in package 'Matrix' Creating a generic function for 'which' from package 'base' in package 'Matrix' in method for 'coerce' with signature '"graphAM","sparseMatrix"': no definition for class "graphAM" in method for 'coerce' with signature '"graph","CsparseMatrix"': no definition for class "graph" in method for 'coerce' with signature '"graph","Matrix"': no definition for class "graph" in method for 'coerce' with signature '"graphNEL","CsparseMatrix"': no definition for class "graphNEL" in method for 'coerce' with signature '"graphNEL","TsparseMatrix"': no definition for class "graphNEL" in method for 'coerce' with signature '"sparseMatrix","graph"': no definition for class "graph" in method for 'coerce' with signature '"sparseMatrix","graphNEL"': no definition for class "graphNEL" in method for 'coerce' with signature '"TsparseMatrix","graphNEL"': no definition for class "graphNEL" Creating a generic function for 'qr.R' from package 'base' in package 'Matrix' Creating a generic function for 'qr.Q' from package 'base' in package 'Matrix' Creating a generic function for 'qr.qy' from package 'base' in package 'Matrix' Creating a generic function for 'qr.qty' from package 'base' in package 'Matrix' Creating a generic function for 'qr.coef' from package 'base' in package 'Matrix' Creating a generic function for 'qr.resid' from package 'base' in package 'Matrix' Creating a generic function for 'qr.fitted' from package 'base' in package 'Matrix' Creating a generic function for 'toeplitz' from package 'stats' in package 'Matrix' ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (Matrix) begin installing recommended package survival begin installing recommended package mgcv * installing *source* package 'survival' ... ** package 'survival' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c agexact.c -o agexact.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c agfit4.c -o agfit4.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c agfit5.c -o agfit5.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c agmart.c -o agmart.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c agmart3.c -o agmart3.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c agscore2.c -o agscore2.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c agsurv3.c -o agsurv3.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c agsurv4.c -o agsurv4.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c agsurv5.c -o agsurv5.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c cdecomp.c -o cdecomp.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c chinv2.c -o chinv2.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c chinv3.c -o chinv3.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c cholesky2.c -o cholesky2.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c cholesky3.c -o cholesky3.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c cholesky5.c -o cholesky5.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c chsolve2.c -o chsolve2.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c chsolve3.c -o chsolve3.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c chsolve5.c -o chsolve5.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c collapse.c -o collapse.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c concordance1.c -o concordance1.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c concordance3.c -o concordance3.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c concordance5.c -o concordance5.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c cox_Rcallback.c -o cox_Rcallback.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c coxcount1.c -o coxcount1.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c coxdetail.c -o coxdetail.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c coxexact.c -o coxexact.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c coxfit5.c -o coxfit5.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c coxfit6.c -o coxfit6.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c coxmart.c -o coxmart.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c coxmart2.c -o coxmart2.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c coxph_wtest.c -o coxph_wtest.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c coxsafe.c -o coxsafe.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c coxscho.c -o coxscho.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c coxscore2.c -o coxscore2.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c coxsurv1.c -o coxsurv1.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c coxsurv2.c -o coxsurv2.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c dmatrix.c -o dmatrix.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c doloop.c -o doloop.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c finegray.c -o finegray.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c gchol.c -o gchol.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c multicheck.c -o multicheck.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c norisk.c -o norisk.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c pyears1.c -o pyears1.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c pyears2.c -o pyears2.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c pyears3b.c -o pyears3b.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c pystep.c -o pystep.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c survConcordance.c -o survConcordance.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c survdiff2.c -o survdiff2.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c survfit4.c -o survfit4.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c survfitci.c -o survfitci.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c survfitkm.c -o survfitkm.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c survfitresid.c -o survfitresid.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c survpenal.c -o survpenal.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c survreg6.c -o survreg6.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c survreg7.c -o survreg7.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c survregc1.c -o survregc1.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c survregc2.c -o survregc2.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c survsplit.c -o survsplit.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c tmerge.c -o tmerge.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c zph1.c -o zph1.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c zph2.c -o zph2.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -L/usr/local/lib -o survival.so agexact.o agfit4.o agfit5.o agmart.o agmart3.o agscore2.o agsurv3.o agsurv4.o agsurv5.o cdecomp.o chinv2.o chinv3.o cholesky2.o cholesky3.o cholesky5.o chsolve2.o chsolve3.o chsolve5.o collapse.o concordance1.o concordance3.o concordance5.o cox_Rcallback.o coxcount1.o coxdetail.o coxexact.o coxfit5.o coxfit6.o coxmart.o coxmart2.o coxph_wtest.o coxsafe.o coxscho.o coxscore2.o coxsurv1.o coxsurv2.o dmatrix.o doloop.o finegray.o gchol.o init.o multicheck.o norisk.o pyears1.o pyears2.o pyears3b.o pystep.o survConcordance.o survdiff2.o survfit4.o survfitci.o survfitkm.o survfitresid.o survpenal.o survreg6.o survreg7.o survregc1.o survregc2.o survsplit.o tmerge.o zph1.o zph2.o -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -lR -Wl,-framework -Wl,CoreFoundation installing to /Volumes/Builds/Simon/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/library/survival/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (survival) begin installing recommended package boot * installing *source* package 'boot' ... ** package 'boot' successfully unpacked and MD5 sums checked ** using non-staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (boot) * installing *source* package 'mgcv' ... ** package 'mgcv' successfully unpacked and MD5 sums checked ** using non-staged installation ** libs clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c coxph.c -o coxph.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c davies.c -o davies.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c discrete.c -o discrete.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c gdi.c -o gdi.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c magic.c -o magic.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c mat.c -o mat.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c matrix.c -o matrix.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c mgcv.c -o mgcv.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c misc.c -o misc.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c mvn.c -o mvn.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c qp.c -o qp.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c soap.c -o soap.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c sparse-smooth.c -o sparse-smooth.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c sparse.c -o sparse.o clang -mmacosx-version-min=10.13 -I"/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c tprs.c -o tprs.o clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -L/usr/local/lib -o mgcv.so coxph.o davies.o discrete.o gdi.o init.o magic.o mat.o matrix.o mgcv.o misc.o mvn.o qp.o soap.o sparse-smooth.o sparse.o tprs.o -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -lRlapack -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin18/8.2.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -L/Volumes/Builds/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/lib -lR -Wl,-framework -Wl,CoreFoundation ld: warning: ld: warning: dylib (/usr/local/gfortran/lib/libquadmath.dylib) was built for newer macOS version (10.14) than being linked (10.13)dylib (/usr/local/gfortran/lib/libgfortran.dylib) was built for newer macOS version (10.14) than being linked (10.13) installing to /Volumes/Builds/Simon/R4/high-sierra-x86_64/builds/R-4.1-branch-1638325808-36962/R-4.1-branch/library/mgcv/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (mgcv) [[system return code 0x0]]