macOS build result for 1763147165-10eb00ebb8a2653a

Build system: r-oldrel-macosx-arm64|4.6.0|macosx|macOS 13.3.1 (22E261)|Mac mini|Apple M1||en_US.UTF-8|macOS 11.3|clang-1403.0.22.14.1|GNU Fortran (GCC) 14.2.0

You can download a full tar ball results.tar.bz2 which contains the check results, tests, installed packages and binaries. A subset of the files are shown below.

Resetting rust
gcc -o watchdog src/watchdog.c -O3
gcc -o sched src/sched.c -O3
gcc -Wall -o should_build src/should_build.c -O3
mkdir CRAN.meta
mkdir -p CRAN/src/contrib
*** use 'sync.bioc.in' to run CRAN+BioC sync
/Library/Developer/CommandLineTools/usr/bin/make  -C CRAN -f ../Makefile.CRAN cache
ln -s ../CRAN.meta meta
mkdir -p meta/src/contrib
tar fxzO src/contrib/rswipl_9.3.34.tar.gz `echo src/contrib/rswipl_9.3.34.tar.gz | sed -e 's:.*/::' -e 's:_.*::'`/DESCRIPTION > meta/src/contrib/rswipl_9.3.34.DESCRIPTION
../rmdup 'meta/src/contrib/*.DESCRIPTION'
RBUILDS: /Volumes/PkgBuild/work/1763147165-10eb00ebb8a2653a/packages
base: /Volumes/PkgBuild/work/1763147165-10eb00ebb8a2653a/packages/CRAN
sources: /Volumes/PkgBuild/work/1763147165-10eb00ebb8a2653a/packages/CRAN/src/contrib
meta: /Volumes/PkgBuild/work/1763147165-10eb00ebb8a2653a/packages/CRAN/meta/src/contrib
RBIN: R
CLANGPATH: 
 [X11] Using session X at :0
R version 4.6.0
 SKIP_CHK: no
 CHK_ONLY: no
 UPDATE  : no
OUTPUT:
  Rlib: /Volumes/PkgBuild/work/1763147165-10eb00ebb8a2653a/packages/big-sur-arm64/Rlib/4.6
  bin : /Volumes/PkgBuild/work/1763147165-10eb00ebb8a2653a/packages/big-sur-arm64/bin/4.6
  res : /Volumes/PkgBuild/work/1763147165-10eb00ebb8a2653a/packages/big-sur-arm64/results/4.6
RLIBS=/Volumes/PkgBuild/work/1763147165-10eb00ebb8a2653a/packages/big-sur-arm64/Rlib/4.6:/Volumes/PkgBuild/work/1763147165-10eb00ebb8a2653a/packages/big-sur-arm64/CRANlib/4.6
Machine : Mac mini, Apple M1 
System  : macOS 13.3.1 (22E261)
Profile : r-oldrel-macosx-arm64
SDK     : macOS 11.3 (C compiler: clang-1403.0.22.14.1)

Building package dependency tree..
(from /Volumes/PkgBuild/work/1763147165-10eb00ebb8a2653a/packages/CRAN/src/contrib)
./dtree --desc /Volumes/PkgBuild/work/1763147165-10eb00ebb8a2653a/packages/CRAN/meta/src/contrib /Volumes/PkgBuild/work/1763147165-10eb00ebb8a2653a/packages/CRAN/src/contrib > /Volumes/PkgBuild/work/1763147165-10eb00ebb8a2653a/packages/CRAN/dep.list
NOTE: there is no source for package testthat [testthat], installed CRAN version will be used.
NOTE: there is no source for package Rcpp [Rcpp], installed CRAN version will be used.
NOTE: there is no source for package Rcpp [Rcpp], installed CRAN version will be used.
Checking all packages..
1763147186:20251115:080626:rswipl:
  /Volumes/PkgBuild/work/1763147165-10eb00ebb8a2653a/packages/CRAN/src/contrib/rswipl_9.3.34.tar.gz
 - looking for /Volumes/PkgBuild/work/1763147165-10eb00ebb8a2653a/packages/CRAN/meta/src/contrib/rswipl_9.3.34.DESCRIPTION
 - using cached DESCRIPTION file for detection
  - unpacking
  - checking rswipl 
* checking whether package ‘rswipl’ can be installed ... [1s/1s] ERROR
Status: 1 ERROR

* installing *source* package ‘rswipl’ ...
** this is package ‘rswipl’ version ‘9.3.34’
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.3 (clang-1403.0.22.14.1)’
using SDK: ‘MacOSX11.3.1.sdk’
patch -N -p2 < ../inst/patch/02-clib.patch
patching file 'swipl-devel/packages/clib/process.c'
patch -N -p2 < ../inst/patch/03-cpp.patch
patching file 'swipl-devel/packages/cpp/test_cpp.cpp'
patch -N -p2 < ../inst/patch/04-cpp.patch
patching file 'swipl-devel/packages/cpp/test_cpp.pl'
mkdir -p ../build
(cd ../build ; CC="clang -arch arm64 -std=gnu2x" CXX="clang++ -arch arm64 -std=gnu++17" CFLAGS="-falign-functions=64 -Wall -g -O2 " CPPFLAGS="-I/opt/R/arm64/include -I/opt/R/arm64/include" LDFLAGS="-L/opt/R/arm64/lib -L/opt/R/arm64/lib" CXXFLAGS="-falign-functions=64 -Wall -g -O2 " /Applications/CMake.app/Contents/bin/cmake -DCMAKE_CXX_STANDARD=17 -DCMAKE_INSTALL_PREFIX=../inst/swipl -DSWIPL_INSTALL_IN_LIB=ON -DINSTALL_DOCUMENTATION=OFF -DBUILD_TESTING=ON -DINSTALL_TESTS=ON -DSWIPL_PACKAGES_JAVA=OFF -DSWIPL_PACKAGES_GUI=OFF -DSWIPL_PACKAGES_ODBC=OFF -DUSE_GMP=OFF -DSWIPL_PACKAGES_PYTHON=OFF -S ../src/swipl-devel)
-- The C compiler identification is AppleClang 14.0.3.14030022
-- The CXX compiler identification is AppleClang 14.0.3.14030022
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /Library/Developer/CommandLineTools/usr/bin/clang - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /Library/Developer/CommandLineTools/usr/bin/clang++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Setting build type to 'Release' as none was specified.
-- Configuring SWI-Prolog-9.3.34
CMake Error at cmake/port/Darwin.cmake:78 (message):
  Invalid MACOSX_DEPENDENCIES_FROM: HomebrewOpt
Call Stack (most recent call first):
  cmake/Ports.cmake:7 (include)
  CMakeLists.txt:165 (include)


-- Configuring incomplete, errors occurred!
See also "/Volumes/PkgBuild/work/1763147165-10eb00ebb8a2653a/packages/big-sur-arm64/results/4.6/rswipl.Rcheck/00_pkg_src/rswipl/build/CMakeFiles/CMakeOutput.log".
make: *** [../build/done] Error 1
ERROR: compilation failed for package ‘rswipl’
* removing ‘/Volumes/PkgBuild/work/1763147165-10eb00ebb8a2653a/packages/big-sur-arm64/results/4.6/rswipl.Rcheck/rswipl’

* using log directory ‘/Volumes/PkgBuild/work/1763147165-10eb00ebb8a2653a/packages/big-sur-arm64/results/4.6/rswipl.Rcheck’
* using R Under development (unstable) (2025-07-11 r88405)
* using platform: aarch64-apple-darwin20
* R was compiled by
    Apple clang version 16.0.0 (clang-1600.0.26.6)
    GNU Fortran (GCC) 14.2.0
* running under: macOS Ventura 13.3.1
* using session charset: UTF-8
* checking for file ‘rswipl/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘rswipl’ version ‘9.3.34’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘rswipl’ can be installed ... [1s/1s] ERROR
Installation failed.
See ‘/Volumes/PkgBuild/work/1763147165-10eb00ebb8a2653a/packages/big-sur-arm64/results/4.6/rswipl.Rcheck/00install.out’ for details.
* DONE
Status: 1 ERROR
* using check arguments '--no-clean-on-error '

* elapsed time (check, wall clock): 0:20

macOS builder results